ID H2KWK5_ORYSJ Unreviewed; 822 AA.
AC H2KWK5;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Retrotransposon protein, putative, unclassified {ECO:0000313|EMBL:ABG22602.1};
GN OrderedLocusNames=LOC_Os11g47451 {ECO:0000313|EMBL:ABG22602.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:ABG22602.1};
RN [1] {ECO:0000313|EMBL:ABG22602.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2] {ECO:0000313|EMBL:ABG22602.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell C.R., Wing R.A., McCombie W.A., Ouyang S.;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ABG22602.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell R.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DP000010; ABG22602.1; -; Genomic_DNA.
DR AlphaFoldDB; H2KWK5; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 2.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT DOMAIN 581..747
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 758..777
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 822 AA; 92507 MW; 2BC80571EF69918F CRC64;
MVRKANGKWR MCVDFTDLNK ACPKDHFPLP RIDQLVDSTA GCELLSFLDA YSGYHQISMA
KEDEEKIAFI MPFGVFCYVK MPFGLITAGN TFQRTVQGAL NDQLGNNVED YVDDIVVKTK
TSDSLIDDLR ETFDNLRWYR LMLNPEKCTF GVPSGKLLGF LVSRRGIEAN LEKIKAIENM
KSPTRLKEVQ KLTGCMAALS RFVASMGERG QPFFALLKKQ DKFVWTQEAE DAFIALKHYL
SNPPVLVAPQ PNEELFLYIA ATPYSVSTII VVEREGAKTS LLRQRSSPRR EDKIPTDTKA
ALCTDWTMPE NRPDSQTDSE TWTMVFDGAL NSQGAGAGFI LTSPSGDQFK HAIHLNFRAT
NNTAEYKGLL AGIRAAAALG VKRLVVKGDS ELVANQVHKD YKCSSPELSK YLTEVRKLEK
RFDGIELSVK EANDEGSTVV PDINSGATEA EHVVADIETT EDWRTPLIKF LSSDELPEDD
AEAEKITRQA KIYCMIGNDL YKKAPNGVLL KCISSDDDKH LLLDIHEGIC RSHASGRTLV
GKAFRQGFFW PTALKDACYM VQRCEACQFH SKHTRLPAQA LQTIPLTWPF SCWGLDILGP
FPRGQGGYKF LFVAIDKFTK WIEATPTGEI KADNAIKFVK GIFCRYGLPH RIITDNGSQF
INADFQDYCI GLGVKICFAS VSHPQSNGQV KRKNGIVLQG IKTRVYDRLM SHDKKWVKEL
PTVLWAVRTT PTTSNKETPF FLVYGSEAML PTELRHHSTR VQRYSDEEQE EQRSDDVNLL
EEYRERVAVR AAGYQQALRR YHEKRIRACT LSIGDGSKPS RA
//
