GenomeNet

Database: UniProt
Entry: H2LFC3_ORYLA
LinkDB: H2LFC3_ORYLA
Original site: H2LFC3_ORYLA 
ID   H2LFC3_ORYLA            Unreviewed;       479 AA.
AC   H2LFC3;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2012, sequence version 1.
DT   22-NOV-2017, entry version 47.
DE   SubName: Full=Potassium voltage-gated channel, shaker-related, subfamily, member 6 a {ECO:0000313|Ensembl:ENSORLP00000004657};
GN   Name=LOC101161723 {ECO:0000313|Ensembl:ENSORLP00000004657};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae;
OC   Oryziinae; Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000004657, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B.,
RA   Yamada T., Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D.,
RA   Shimada A., Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A.,
RA   Asakawa S., Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K.,
RA   Sugano S., Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F.,
RA   Nomoto H., Nogata K., Morishita T., Endo T., Shin-I T., Takeda H.,
RA   Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome
RT   evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000004657}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000004657};
RG   Ensembl;
RL   Submitted (FEB-2012) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the potassium channel family.
CC       {ECO:0000256|SAAS:SAAS00692852}.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSORLP00000004657}.
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DR   EMBL; BAAF04034753; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_011474250.1; XM_011475948.1.
DR   STRING; 8090.ENSORLP00000004657; -.
DR   Ensembl; ENSORLT00000004658; ENSORLP00000004657; ENSORLG00000003738.
DR   GeneID; 101161723; -.
DR   eggNOG; KOG1545; Eukaryota.
DR   eggNOG; COG1226; LUCA.
DR   GeneTree; ENSGT00760000118846; -.
DR   InParanoid; H2LFC3; -.
DR   OMA; IAPYFIT; -.
DR   OrthoDB; EOG091G10NU; -.
DR   TreeFam; TF313103; -.
DR   Proteomes; UP000001038; Chromosome 6.
DR   GO; GO:0008076; C:voltage-gated potassium channel complex; IEA:InterPro.
DR   GO; GO:0005249; F:voltage-gated potassium channel activity; IEA:InterPro.
DR   GO; GO:0051260; P:protein homooligomerization; IEA:InterPro.
DR   InterPro; IPR000210; BTB/POZ_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR003968; K_chnl_volt-dep_Kv.
DR   InterPro; IPR003972; K_chnl_volt-dep_Kv1.
DR   InterPro; IPR004050; K_chnl_volt-dep_Kv1.3.
DR   InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR   InterPro; IPR003131; T1-type_BTB.
DR   InterPro; IPR028325; VG_K_chnl.
DR   PANTHER; PTHR11537; PTHR11537; 1.
DR   Pfam; PF02214; BTB_2; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   PRINTS; PR00169; KCHANNEL.
DR   PRINTS; PR01510; KV13CHANNEL.
DR   PRINTS; PR01491; KVCHANNEL.
DR   PRINTS; PR01496; SHAKERCHANEL.
DR   SMART; SM00225; BTB; 1.
DR   SUPFAM; SSF54695; SSF54695; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001038};
KW   Ion channel {ECO:0000256|SAAS:SAAS00417203};
KW   Ion transport {ECO:0000256|SAAS:SAAS00417186};
KW   Membrane {ECO:0000256|SAAS:SAAS00788393, ECO:0000256|SAM:Phobius};
KW   Potassium {ECO:0000256|SAAS:SAAS00417282};
KW   Potassium channel {ECO:0000256|SAAS:SAAS00417246};
KW   Potassium transport {ECO:0000256|SAAS:SAAS00417240};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00793138,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00789957,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00417268};
KW   Voltage-gated channel {ECO:0000256|SAAS:SAAS00091688}.
FT   TRANSMEM    165    186       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    216    236       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    319    340       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    380    401       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       34    134       BTB. {ECO:0000259|SMART:SM00225}.
SQ   SEQUENCE   479 AA;  54381 MW;  E07631297C074DC0 CRC64;
     MTVVSEHDHE ETVAVTPLLQ DAADLEPADQ ECSERLVINI SGLRFETQLK TLSRFPTTLL
     GDPRKRIRFY DPLRNEYFFD RNRPSFDAIL YYYQSGGRLR RPVSVPVDIF LEELKFYELE
     EEVIELFKDD EGLPREEERP LPSNEFQRQV WLLFEYPESS GPARMIAIVS VMVILISIVI
     FCLETLPEFK DVPPEPDNHA NGSAHGKEPS PFTDPFFMVE TLCIVWFSFE FMMRFLSCPS
     KPVFFKNIMN LIDVVAIAPY FITLGMDLAE HQGSSQQAAS LAILRVIRLV RVFRIFKLSR
     HSKGLQILGQ TLRASLRELG LLIFFLIIGV VLFSSSVYFA EVEDPNSEFS SIPDAFWWAV
     VTMTTVGYGD MCPTTIGGKF VGSLCAIAGV LTIALPVPVI VSNFNYFYHR ENEEEENVQH
     VHVTCGLVEQ QPYTGEGDSI RSNLSLSQTE SYQESDDLET LTHPSTNQSD AYVGKLTDV
//
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