ID H2MJ69_ORYLA Unreviewed; 476 AA.
AC H2MJ69;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 68.
DE RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
GN Name=LOC101172611 {ECO:0000313|Ensembl:ENSORLP00000018708.2};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000018708.2, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000018708.2, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000018708.2,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000018708.2}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000018708.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; H2MJ69; -.
DR Ensembl; ENSORLT00000018709.2; ENSORLP00000018708.2; ENSORLG00000014922.2.
DR eggNOG; KOG2748; Eukaryota.
DR GeneTree; ENSGT00940000158816; -.
DR HOGENOM; CLU_027573_0_0_1; -.
DR TreeFam; TF106456; -.
DR Proteomes; UP000001038; Chromosome 19.
DR Bgee; ENSORLG00000014922; Expressed in animal zygote and 14 other cell types or tissues.
DR GO; GO:0035102; C:PRC1 complex; IEA:InterPro.
DR CDD; cd18647; CD_Cbx2; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR InterPro; IPR042796; CBX2.
DR InterPro; IPR033773; CBX7_C.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR PANTHER; PTHR46860; CHROMOBOX PROTEIN HOMOLOG 2; 1.
DR PANTHER; PTHR46860:SF1; CHROMOBOX PROTEIN HOMOLOG 2; 1.
DR Pfam; PF17218; CBX7_C; 1.
DR Pfam; PF00385; Chromo; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT DOMAIN 10..68
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 63..196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 209..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 333..437
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..107
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 172..196
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..234
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 251..273
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..314
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..388
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 389..403
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 476 AA; 51286 MW; DA3C25C106445936 CRC64;
MEGVTVGQVF DAECILSKRS RKGKFEYLVK WRGWSSKHNS WEPEENILDP RLLAAFHKRE
QERELLFQKK GKRPRGRPRK ILPPLTPDKD SRSSSCSSSG LSSPRSSSSS EDEEHTKKAK
PSPVPQKRPH IMLAKADPPH KKKRGRKPLP PDLKALRQDT RPGIKKPLQP ASFTYLSRTS
REEAAAPSLA FSQSAASKVG SISMWVGRSL SASSPSSSKT SLSQKNSYLK RSFSESGGGS
RADGLKMSAV KPGGTSSSPG AHGSFSGGQV GIQSPAPGQK RPEGQAAKTG VVQHKQQNPV
LSKPSSSSPF LRDRASQALN LRALNLQSVG KTYAGGAHGS TDFRSGTAKG GPRSGLSAGG
GAERGRDREP AIRRDGALRD RRNQRSGSQD RGLNELSTGD SDEVSSSESE RGAALFPDKI
RPSLGASATD SDTETDWRPE RCLLEHVSVT DVTANFITVT VKESPTSVGF FNSRNH
//
