GenomeNet

Database: UniProt
Entry: H2N1F6_ORYLA
LinkDB: H2N1F6_ORYLA
Original site: H2N1F6_ORYLA 
ID   H2N1F6_ORYLA            Unreviewed;       683 AA.
AC   H2N1F6;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 2.
DT   24-JAN-2024, entry version 60.
DE   SubName: Full=Interacts with SUPT6H, CTD assembly factor 1 {ECO:0000313|Ensembl:ENSORLP00000025259.2};
GN   Name=IWS1 {ECO:0000313|Ensembl:ENSORLP00000025259.2};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC   Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000025259.2, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Ensembl:ENSORLP00000025259.2, ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000025259.2,
RC   ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA   Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA   Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA   Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA   Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA   Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000025259.2}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000025259.2};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00649}.
CC   -!- SIMILARITY: Belongs to the IWS1 family.
CC       {ECO:0000256|ARBA:ARBA00037992}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; H2N1F6; -.
DR   STRING; 8090.ENSORLP00000025259; -.
DR   Ensembl; ENSORLT00000025260.2; ENSORLP00000025259.2; ENSORLG00000020380.2.
DR   eggNOG; KOG1793; Eukaryota.
DR   GeneTree; ENSGT00720000108834; -.
DR   HOGENOM; CLU_040584_0_0_1; -.
DR   InParanoid; H2N1F6; -.
DR   TreeFam; TF315504; -.
DR   Proteomes; UP000001038; Chromosome 13.
DR   Bgee; ENSORLG00000020380; Expressed in blastula and 14 other cell types or tissues.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IBA:GO_Central.
DR   Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR   InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR   InterPro; IPR017923; TFIIS_N.
DR   PANTHER; PTHR46010; PROTEIN IWS1 HOMOLOG; 1.
DR   PANTHER; PTHR46010:SF1; PROTEIN IWS1 HOMOLOG; 1.
DR   Pfam; PF08711; Med26; 1.
DR   PROSITE; PS51319; TFIIS_N; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT   DOMAIN          480..558
FT                   /note="TFIIS N-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51319"
FT   REGION          1..390
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          562..620
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        26..50
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        105..125
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        174..276
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        324..342
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        357..384
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        566..580
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        588..605
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   683 AA;  75516 MW;  BC3775EE151D53EF CRC64;
     MDRDEEDFVS GSRSDDGGGT PVLDEHPLSD GEEMRSPSRQ AEDEGSNDEA PPPAVKRGGA
     SGSENEPDSD SEGEAPGSPN NENKSDSDGE APPPAGSGDY SPVKRRSSGS EDEESLQKRR
     LSGSDNEGHS SPTKPRGSSS DLEEGAGTPK PAPNADSEDE DAKAAASPNS DSDAETPSRR
     KSAQIDSDEE DKPEEGHKEG KWKAVMQSDS EEEEEEGRRR STAAGSDEDE KRSEDSEEER
     PAKRKKVIMS DSEDDEEEKA DRPAPKRSRA VSDEENSDSD DASVGPDRSL AAKLKELGSD
     SSSEDDGGGA GPGKQQNKEK ALFGSDSESG DEEEKMIADI FGESGDEEEE EFTGFNQEDL
     EADKKESKER PEVEESDSDE GVDRGGQDTS FMSDFDLMLA KRKAINSRRR RHRDGGTFIS
     DADDVVSAMI TKMNEAAEED RTLNKQKKPA LKKLTLLPQV VMHLKKQDLK ETFIDSGVMS
     AITEWISPLP DKSLPALRIR EELLRILQEL PSVSQETLKH SKIGRAVMFL YKHPKESRPN
     KDLALKLINE WSRPIFGLTS NYKSMTREER QQRDLDQQMP QRRRLSSGGQ TPRRDLEKQL
     TGEEKALRPG DPGFCARARV PMPSNKDYVV RPKWNVEGDS SRSGYKKAIS LLEKHKRRFA
     EERKLRRPQG AVKISIEGNR MPL
//
DBGET integrated database retrieval system