GenomeNet

Database: UniProt
Entry: H2V4A3_TAKRU
LinkDB: H2V4A3_TAKRU
Original site: H2V4A3_TAKRU 
ID   H2V4A3_TAKRU            Unreviewed;       772 AA.
AC   H2V4A3;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   17-JUN-2020, sequence version 3.
DT   27-MAR-2024, entry version 63.
DE   SubName: Full=RNA binding motif protein 26 {ECO:0000313|Ensembl:ENSTRUP00000044037.3};
GN   Name=RBM26 {ECO:0000313|Ensembl:ENSTRUP00000044037.3};
OS   Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu.
OX   NCBI_TaxID=31033 {ECO:0000313|Ensembl:ENSTRUP00000044037.3, ECO:0000313|Proteomes:UP000005226};
RN   [1] {ECO:0000313|Ensembl:ENSTRUP00000044037.3, ECO:0000313|Proteomes:UP000005226}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21551351;
RA   Kai W., Kikuchi K., Tohari S., Chew A.K., Tay A., Fujiwara A., Hosoya S.,
RA   Suetake H., Naruse K., Brenner S., Suzuki Y., Venkatesh B.;
RT   "Integration of the genetic map and genome assembly of fugu facilitates
RT   insights into distinct features of genome evolution in teleosts and
RT   mammals.";
RL   Genome Biol. Evol. 3:424-442(2011).
RN   [2] {ECO:0000313|Ensembl:ENSTRUP00000044037.3}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
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DR   AlphaFoldDB; H2V4A3; -.
DR   STRING; 31033.ENSTRUP00000087805; -.
DR   Ensembl; ENSTRUT00000044185.3; ENSTRUP00000044037.3; ENSTRUG00000017189.3.
DR   GeneTree; ENSGT00510000046929; -.
DR   Proteomes; UP000005226; Chromosome 13.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.70.330; -; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR045137; RBM26/27.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR000571; Znf_CCCH.
DR   InterPro; IPR036855; Znf_CCCH_sf.
DR   PANTHER; PTHR14398; RNA RECOGNITION RRM/RNP DOMAIN; 1.
DR   PANTHER; PTHR14398:SF2; RNA-BINDING PROTEIN 26; 1.
DR   Pfam; PF14605; Nup35_RRM_2; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 2.
DR   SMART; SM00356; ZnF_C3H1; 1.
DR   SUPFAM; SSF90229; CCCH zinc finger; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR   PROSITE; PS50102; RRM; 1.
DR   PROSITE; PS50103; ZF_C3H1; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000005226};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00723}.
FT   DOMAIN          108..136
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50103"
FT   DOMAIN          353..427
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   ZN_FING         108..136
FT                   /note="C3H1-type"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT   REGION          1..65
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          149..217
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          312..344
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          654..673
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          751..772
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          514..555
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1..43
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        44..65
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        151..216
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        312..334
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   772 AA;  86111 MW;  527C8A7240E969FD CRC64;
     MRERDRERER ERDNSRSHSQ SRTRSRSRER ESGKLKYEQD QRAESSDGYT PAPLVSTATT
     SHFPVPTLSS TITVVAPTHH HNNTSESWSD FHPDHPVDHV PFVRAPPPQQ RKRCRDYDEK
     GLCMRGDMCP FDHGSDPVVV EDVNLPNIMS FQPPPQIPGV EPPPPPGLPP PPPPPLMNAP
     PVNLRPPVPP PCALPPSLPP VQGPPPPLPP LQPSGMDAPP NSITSTVPTI VTSGIRCSLP
     HASLPMFSSD TYDNDGYNPE APSITNTSRP LYRHRVNAQR PNLIGLTMGD VDQPQRGKIP
     NNSMRIVMES DSRKRLPPHD GGIPIKKPRF DKPNFNKPNH QGYHKRLPFS LNTKLLVRQI
     PPLLNNISKL NEHFSKFGTI VNLQVAYQND GEAALIQFAS PDEARRAIQS TEAVLNNRFI
     SVHWFRDNGN DGQELLRSDV QSVKDRLGPL LTILFSFFLK NSLLQNPSKT SVKERLGFST
     KPAAPVEKVF SSSMGLTKTV YNPAAITAAQ NSSEEALKKK LEALKLQQDV KKKKQEILEK
     NIETQKLLLS KLEKNKGMKA EDKAKCMKTL SMLIKSISKL QDEIKGVSSS NSQQRTAKSK
     AQAQKELLDA ELDLYKKSQA GEDTAMLKLQ YTQLQIEAAK RGILAPGRGR GLFTRGRGSA
     RGRASRGRGR GAPVHAVVDH RPRALQISGF VDSDRVDLLP HFAQFGEIED CQIDENNLSA
     VVTYKSRAEA EQIVFLSTSF TFQYQEESLS DDALLQDDDE EEDDNEPRSW RR
//
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