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Database: UniProt
Entry: H2Y2U9_CIOIN
LinkDB: H2Y2U9_CIOIN
Original site: H2Y2U9_CIOIN 
ID   H2Y2U9_CIOIN            Unreviewed;       884 AA.
AC   H2Y2U9;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 62.
DE   RecName: Full=VPS9 domain-containing protein {ECO:0000259|PROSITE:PS51205};
OS   Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).
OC   Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
OC   Cionidae; Ciona.
OX   NCBI_TaxID=7719 {ECO:0000313|Ensembl:ENSCINP00000036234.1, ECO:0000313|Proteomes:UP000008144};
RN   [1] {ECO:0000313|Proteomes:UP000008144}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=12481130; DOI=10.1126/science.1080049;
RA   Dehal P., Satou Y., Campbell R.K., Chapman J., Degnan B., De Tomaso A.,
RA   Davidson B., Di Gregorio A., Gelpke M., Goodstein D.M., Harafuji N.,
RA   Hastings K.E., Ho I., Hotta K., Huang W., Kawashima T., Lemaire P.,
RA   Martinez D., Meinertzhagen I.A., Necula S., Nonaka M., Putnam N., Rash S.,
RA   Saiga H., Satake M., Terry A., Yamada L., Wang H.G., Awazu S., Azumi K.,
RA   Boore J., Branno M., Chin-Bow S., DeSantis R., Doyle S., Francino P.,
RA   Keys D.N., Haga S., Hayashi H., Hino K., Imai K.S., Inaba K., Kano S.,
RA   Kobayashi K., Kobayashi M., Lee B.I., Makabe K.W., Manohar C., Matassi G.,
RA   Medina M., Mochizuki Y., Mount S., Morishita T., Miura S., Nakayama A.,
RA   Nishizaka S., Nomoto H., Ohta F., Oishi K., Rigoutsos I., Sano M.,
RA   Sasaki A., Sasakura Y., Shoguchi E., Shin-i T., Spagnuolo A., Stainier D.,
RA   Suzuki M.M., Tassy O., Takatori N., Tokuoka M., Yagi K., Yoshizaki F.,
RA   Wada S., Zhang C., Hyatt P.D., Larimer F., Detter C., Doggett N.,
RA   Glavina T., Hawkins T., Richardson P., Lucas S., Kohara Y., Levine M.,
RA   Satoh N., Rokhsar D.S.;
RT   "The draft genome of Ciona intestinalis: insights into chordate and
RT   vertebrate origins.";
RL   Science 298:2157-2167(2002).
RN   [2] {ECO:0000313|Ensembl:ENSCINP00000036234.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   EMBL; EAAA01000692; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; H2Y2U9; -.
DR   STRING; 7719.ENSCINP00000036234; -.
DR   Ensembl; ENSCINT00000031508.1; ENSCINP00000036234.1; ENSCING00000021730.1.
DR   GeneTree; ENSGT00940000157021; -.
DR   HOGENOM; CLU_010760_0_1_1; -.
DR   InParanoid; H2Y2U9; -.
DR   OMA; LCHPLCT; -.
DR   TreeFam; TF351261; -.
DR   Proteomes; UP000008144; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:GOC.
DR   GO; GO:0005769; C:early endosome; IBA:GO_Central.
DR   GO; GO:0005770; C:late endosome; IBA:GO_Central.
DR   GO; GO:0043005; C:neuron projection; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0030133; C:transport vesicle; IBA:GO_Central.
DR   GO; GO:0097422; C:tubular endosome; IBA:GO_Central.
DR   GO; GO:0005085; F:guanyl-nucleotide exchange factor activity; IBA:GO_Central.
DR   GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR   GO; GO:0045022; P:early endosome to late endosome transport; IBA:GO_Central.
DR   GO; GO:0048812; P:neuron projection morphogenesis; IBA:GO_Central.
DR   CDD; cd22885; ANKRD27_zf1; 1.
DR   Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 3.
DR   Gene3D; 1.20.1050.80; VPS9 domain; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR003123; VPS9.
DR   InterPro; IPR037191; VPS9_dom_sf.
DR   PANTHER; PTHR24170; ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27; 1.
DR   PANTHER; PTHR24170:SF2; ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27; 1.
DR   Pfam; PF00023; Ank; 3.
DR   Pfam; PF12796; Ank_2; 2.
DR   Pfam; PF02204; VPS9; 1.
DR   PRINTS; PR01415; ANKYRIN.
DR   SMART; SM00248; ANK; 8.
DR   SMART; SM00167; VPS9; 1.
DR   SUPFAM; SSF48403; Ankyrin repeat; 2.
DR   SUPFAM; SSF109993; VPS9 domain; 1.
DR   PROSITE; PS50297; ANK_REP_REGION; 6.
DR   PROSITE; PS50088; ANK_REPEAT; 7.
DR   PROSITE; PS51205; VPS9; 1.
PE   4: Predicted;
KW   ANK repeat {ECO:0000256|PROSITE-ProRule:PRU00023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008144}.
FT   DOMAIN          244..382
FT                   /note="VPS9"
FT                   /evidence="ECO:0000259|PROSITE:PS51205"
FT   REPEAT          462..494
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          495..527
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          566..598
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          741..773
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          775..807
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          808..840
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   REPEAT          841..873
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
SQ   SEQUENCE   884 AA;  99959 MW;  8AC30D96619F9876 CRC64;
     MSAYDEDLTE NGWYLALSQK HEDLFIRATN ERWMICIPRV GSWKGGIEDG DLFSQKSFES
     HILKQLVVYG DKPEVESNKY LTYNGKEVFI TGPTVTCGEG FTNNFNIPIL FEETFFNQHD
     ESYVVLCLSQ PLEQHLVSVG GNFFSPTDEE SSSSEVEKAS GPRWESYGSY VWTRAYHGKR
     LHHFIDECAE KFITSMVQNV IKDSKLKKYI EVPSQQTALY SSLESYILHG TYVVNMRELN
     DIMSVQDEQL NKITRNLSSV KYDDLEIKEE LCTGIPRARR ELSMMNRFRT PGEKLECLEN
     TIRFLSPRTS QATQPIVMSS DDLLPILIYL VLKCEITNWL ANLMYMKYFY FTKTNKDQHS
     FYLATLEAAV EHVRNRNIKI DRTKIAGNVP RLFTWSDKLT ILLIENVDVA GVDRLLRQAQ
     DMKSLHDHDK CHPLCECNNC TKLSNRKANR GSYVSVSSRD DRGRTALHIA AVTGKHEVVD
     TLLNHGSDIN ASDYHGATPL HLAAQEGSQS VIFLLLHHEA AANAVDNNNN TPLHLACYGG
     HDGSVKAMLF YDPVRAVVKV DAVNDQGDIP LHIASRWGYA SIAQALVECG SDISCQNRKK
     ESPLDVAHNS QMKYILQHTE LTVTYSNLRP EHTVPVVNKT KHSNINQLTQ KINQSNALKP
     KSSNLIGQFK REKPSLPKQI LKLHRAVTDN DVHMVAYMCG WGLDDDRSCD PLCQCYKCQP
     SQVVLSYMYD IILHANSTSP DGSTPLLISC MRGYVEMTRM LLDHDARVGC KSKDRELSPL
     HLACQYGYEE IVRLLLDHGA VCDVRNAEGN TPIYMCAANG HASCAEVLLE FGASVNIRNH
     KYDAPLHEAV KWRNINVATL LMESGAMTYY KNKQGITPLQ MAKE
//
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