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Database: UniProt
Entry: H3A313_LATCH
LinkDB: H3A313_LATCH
Original site: H3A313_LATCH 
ID   H3A313_LATCH            Unreviewed;      1268 AA.
AC   H3A313;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   RecName: Full=Vigilin {ECO:0000256|ARBA:ARBA00039270};
GN   Name=HDLBP {ECO:0000313|Ensembl:ENSLACP00000004034.1};
OS   Latimeria chalumnae (Coelacanth).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Coelacanthiformes; Coelacanthidae; Latimeria.
OX   NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000004034.1, ECO:0000313|Proteomes:UP000008672};
RN   [1] {ECO:0000313|Proteomes:UP000008672}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT   "The draft genome of Latimeria chalumnae.";
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLACP00000004034.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR   EMBL; AFYH01110783; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110784; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110785; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110786; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110787; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110788; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110789; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110790; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110791; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01110792; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; H3A313; -.
DR   STRING; 7897.ENSLACP00000004034; -.
DR   Ensembl; ENSLACT00000004070.1; ENSLACP00000004034.1; ENSLACG00000003592.1.
DR   eggNOG; KOG2208; Eukaryota.
DR   GeneTree; ENSGT00900000141059; -.
DR   HOGENOM; CLU_008532_0_0_1; -.
DR   InParanoid; H3A313; -.
DR   OMA; KTGCRIN; -.
DR   TreeFam; TF323767; -.
DR   Proteomes; UP000008672; Unassembled WGS sequence.
DR   Bgee; ENSLACG00000003592; Expressed in chordate pharynx and 6 other cell types or tissues.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd22405; KH-I_Vigilin_rpt1; 1.
DR   CDD; cd22413; KH-I_Vigilin_rpt10; 1.
DR   CDD; cd22414; KH-I_Vigilin_rpt11; 1.
DR   CDD; cd22415; KH-I_Vigilin_rpt12; 1.
DR   CDD; cd22416; KH-I_Vigilin_rpt13; 1.
DR   CDD; cd22417; KH-I_Vigilin_rpt14; 1.
DR   CDD; cd22418; KH-I_Vigilin_rpt15; 1.
DR   CDD; cd22406; KH-I_Vigilin_rpt2; 1.
DR   CDD; cd22407; KH-I_Vigilin_rpt3; 1.
DR   CDD; cd22408; KH-I_Vigilin_rpt4; 1.
DR   CDD; cd22409; KH-I_Vigilin_rpt5; 1.
DR   CDD; cd02394; KH-I_Vigilin_rpt6; 1.
DR   CDD; cd22410; KH-I_Vigilin_rpt7; 1.
DR   CDD; cd22411; KH-I_Vigilin_rpt8; 1.
DR   CDD; cd22412; KH-I_Vigilin_rpt9; 1.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 14.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   PANTHER; PTHR10627; SCP160; 1.
DR   PANTHER; PTHR10627:SF34; VIGILIN; 1.
DR   Pfam; PF00013; KH_1; 14.
DR   SMART; SM00322; KH; 14.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 13.
DR   PROSITE; PS50084; KH_TYPE_1; 14.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT   DOMAIN          152..220
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          224..292
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          297..365
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          366..432
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          437..505
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          509..578
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          583..651
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          655..724
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          729..798
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          802..871
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          875..971
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          972..1038
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          1050..1119
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          1123..1192
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   REGION          917..937
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1225..1268
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          779..806
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   1268 AA;  141422 MW;  9FC9B3226A698833 CRC64;
     MSSVAVLTQE SFAEHRSGLI QGQVTVGGGG FPYCSEEEND PPTYKDAFPP LPEKVAASDA
     VQEQVGAWNK IRPIKSSIIT QVFHVPLEER KYKDMNQFGE GEQAKICLDI MQKTGAHLEL
     SLAKDQGLSI MVSGKLEAVM KARKEIVARL QTQASATVAI PKEHHKFVIG KNGEKLQELE
     LKTATKIQIP RPDDTSNQIK ITGTKEGIEK ARHEILLISA EQDKRAVERV NIEKAFHPFI
     AGAYNKLVSE IMQETSTRIN IPPPSVNKTE IVITGEKEQL ATAVARLKKI YEEKKKKTTT
     IAVEVKKSQH KYVIGPKGNS LQEILERTGV SVEIPLPDSS SETVILRGEP DKLGQALTEV
     YAKANSFTVS SVTAPSWLHR FIIGKKGQNL SKITQQMPKV HIEFTEGVDK IILEGPTEEV
     QEVQTQIEAM VTDLVSRMDY AEITVDPKFH RHLIGKGGAN INRIKEQYKV SVRIPPDNEK
     SNLIRIEGDP QGVQQAKKEL LELASRMENE RTKDLIIEQR FHRTIIGQKG EKIKEIRDKF
     PEVIINFPDP VQKSEIVQLR GPKNEVEKCA KFMQKMVADL VSSSYSISVP IFKQFHKNII
     GKGGVNIKKI REETNTKIDL PAENNNSEMI IITGKKVNCD AARNRILAIQ KELANISEVE
     VCIPAKLHNS LIGSKGRLVR SIMEECGGVH IHFPMEGSGS DTVTIRGPVE DVEKAKRQLL
     QLAEEKQIKS FTVELRAKPE YHKFLIGKGG GNIRKVRDNT GARIIFPTAE DKDQELITIV
     GTEDAVKEAQ KELEVLIKNL DNVVEDSMAV DPKHHRYFVA RRGQVLRDIA EEYGGVMVSF
     PRTGTQSDKV TLKGAKDCVE AAKKRMLEII EDLEAQVTIE CVISQKFHRS IMGPKGSRVQ
     QITKDFNVQI KFPDREEAPA AGTEPIQETG EANGEVKEVD PTIPKKCDII IISGRKEKCE
     AAKEALEALV PVTIEVEVPF DLHRYIIGQK GSGIRKMMDE FEVNIQVPAP ELQLDIISIT
     GLASHVDRAR VGLLDRVKEL QAEQEDRALR SFKLTISVDP KYHPKIIGRK GAVITQIRME
     HDVNIQFPDK NDENQDQITI TGYEKNAEGA RNAIMKIVGE LEEMVSEDIT LDHRIHARVI
     GARGKGIRKI MDEFKVDIRF PQSGAADPNC VTVTGLPENV DEAIDHLLNL EEEYMSDVVE
     TEAMRAYMKP RDAVEETRGP SKGFVVRDAP WAAGPTEKAP DMSSSEDFPS FGAPVTPKTT
     SPWGPKRF
//
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