ID H3AK27_LATCH Unreviewed; 617 AA.
AC H3AK27;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 64.
DE SubName: Full=Leucine rich repeat and Ig domain containing 1 {ECO:0000313|Ensembl:ENSLACP00000009998.1};
GN Name=LINGO1 {ECO:0000313|Ensembl:ENSLACP00000009998.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000009998.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000009998.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-
CC pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
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DR EMBL; AFYH01128674; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3AK27; -.
DR STRING; 7897.ENSLACP00000009998; -.
DR Ensembl; ENSLACT00000010075.1; ENSLACP00000009998.1; ENSLACG00000008812.1.
DR eggNOG; KOG0619; Eukaryota.
DR GeneTree; ENSGT00940000154996; -.
DR HOGENOM; CLU_000288_18_24_1; -.
DR InParanoid; H3AK27; -.
DR OMA; MVAREAT; -.
DR TreeFam; TF334360; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR026906; LRR_5.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR24373:SF31; LEUCINE-RICH REPEAT AND IMMUNOGLOBULIN-LIKE DOMAIN-CONTAINING NOGO RECEPTOR-INTERACTING PROTEIN 1; 1.
DR PANTHER; PTHR24373; SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN; 1.
DR Pfam; PF07679; I-set; 1.
DR Pfam; PF13306; LRR_5; 1.
DR Pfam; PF13855; LRR_8; 2.
DR SMART; SM00409; IG; 1.
DR SMART; SM00408; IGc2; 1.
DR SMART; SM00369; LRR_TYP; 9.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS51450; LRR; 2.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..38
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 39..617
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003580349"
FT TRANSMEM 554..579
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 408..510
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
SQ SEQUENCE 617 AA; 70333 MW; F4E0C45814CC0EFB CRC64;
VKGRMVARGA SMNIPILACW QPILLLMLGS ILSGSATGCP ARCECLAQER SVLCHRKRFI
AVPEGIPTET RLLDLSKNRI KTINQDEFLN YPHLEELELN ENIITTIEPG AFNNLFNMRT
LGLRSNRLKL IPLGVFTGLS NLTQLDISEN KIVILLDYMF QDLYNLKSLE VGDNDLVYIS
HRAFSGLNSL EQLTLEKCNL TTIPTEALSH LHGLIVLRLR HLNINAVRDY SFKRLYRLKI
LEISNWPYLD TMTPNCLYGL NLTSLTITHC NLTFVPYVAI RHLVYLRFLN LSYNPITTIE
GSMLHDLLRL QEIHLVGGQL MTVEPYAFRG LNYLRILNVS GNNLNTLEES AFHSVGNLET
LILDNNRLAC DCRLLWVFRR RWRLNFNKQQ PTCATPEFVQ GKEFKDFPDI LLPNYFTCRK
SRIRDRKPQQ IHVDEGHTVH FVCRADGDPP PVIFWLSPRK HLISTKSNGR LTVFPDGTLE
VRYAQIQDNG TYVCIASNAG GNDTAFAHLH VRSYSPDWPH QPNKTFAFIS NQPNENNTNS
TRTSVPFPFD IKTLIIATTM GFISFLGVVL FCLVLLFLWS RGKGNTKHNI EIEYVPRKSD
AGISSADAPR KFNMKMI
//