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Database: UniProt
Entry: H3AK27_LATCH
LinkDB: H3AK27_LATCH
Original site: H3AK27_LATCH 
ID   H3AK27_LATCH            Unreviewed;       617 AA.
AC   H3AK27;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   SubName: Full=Leucine rich repeat and Ig domain containing 1 {ECO:0000313|Ensembl:ENSLACP00000009998.1};
GN   Name=LINGO1 {ECO:0000313|Ensembl:ENSLACP00000009998.1};
OS   Latimeria chalumnae (Coelacanth).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Coelacanthiformes; Coelacanthidae; Latimeria.
OX   NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000009998.1, ECO:0000313|Proteomes:UP000008672};
RN   [1] {ECO:0000313|Proteomes:UP000008672}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT   "The draft genome of Latimeria chalumnae.";
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLACP00000009998.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-
CC       pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
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DR   EMBL; AFYH01128674; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; H3AK27; -.
DR   STRING; 7897.ENSLACP00000009998; -.
DR   Ensembl; ENSLACT00000010075.1; ENSLACP00000009998.1; ENSLACG00000008812.1.
DR   eggNOG; KOG0619; Eukaryota.
DR   GeneTree; ENSGT00940000154996; -.
DR   HOGENOM; CLU_000288_18_24_1; -.
DR   InParanoid; H3AK27; -.
DR   OMA; MVAREAT; -.
DR   TreeFam; TF334360; -.
DR   Proteomes; UP000008672; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR036179; Ig-like_dom_sf.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR013098; Ig_I-set.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR   InterPro; IPR026906; LRR_5.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   PANTHER; PTHR24373:SF31; LEUCINE-RICH REPEAT AND IMMUNOGLOBULIN-LIKE DOMAIN-CONTAINING NOGO RECEPTOR-INTERACTING PROTEIN 1; 1.
DR   PANTHER; PTHR24373; SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN; 1.
DR   Pfam; PF07679; I-set; 1.
DR   Pfam; PF13306; LRR_5; 1.
DR   Pfam; PF13855; LRR_8; 2.
DR   SMART; SM00409; IG; 1.
DR   SMART; SM00408; IGc2; 1.
DR   SMART; SM00369; LRR_TYP; 9.
DR   SUPFAM; SSF48726; Immunoglobulin; 1.
DR   SUPFAM; SSF52058; L domain-like; 1.
DR   PROSITE; PS50835; IG_LIKE; 1.
DR   PROSITE; PS51450; LRR; 2.
PE   4: Predicted;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..38
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           39..617
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5003580349"
FT   TRANSMEM        554..579
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          408..510
FT                   /note="Ig-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50835"
SQ   SEQUENCE   617 AA;  70333 MW;  F4E0C45814CC0EFB CRC64;
     VKGRMVARGA SMNIPILACW QPILLLMLGS ILSGSATGCP ARCECLAQER SVLCHRKRFI
     AVPEGIPTET RLLDLSKNRI KTINQDEFLN YPHLEELELN ENIITTIEPG AFNNLFNMRT
     LGLRSNRLKL IPLGVFTGLS NLTQLDISEN KIVILLDYMF QDLYNLKSLE VGDNDLVYIS
     HRAFSGLNSL EQLTLEKCNL TTIPTEALSH LHGLIVLRLR HLNINAVRDY SFKRLYRLKI
     LEISNWPYLD TMTPNCLYGL NLTSLTITHC NLTFVPYVAI RHLVYLRFLN LSYNPITTIE
     GSMLHDLLRL QEIHLVGGQL MTVEPYAFRG LNYLRILNVS GNNLNTLEES AFHSVGNLET
     LILDNNRLAC DCRLLWVFRR RWRLNFNKQQ PTCATPEFVQ GKEFKDFPDI LLPNYFTCRK
     SRIRDRKPQQ IHVDEGHTVH FVCRADGDPP PVIFWLSPRK HLISTKSNGR LTVFPDGTLE
     VRYAQIQDNG TYVCIASNAG GNDTAFAHLH VRSYSPDWPH QPNKTFAFIS NQPNENNTNS
     TRTSVPFPFD IKTLIIATTM GFISFLGVVL FCLVLLFLWS RGKGNTKHNI EIEYVPRKSD
     AGISSADAPR KFNMKMI
//
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