ID H3BCJ2_LATCH Unreviewed; 411 AA.
AC H3BCJ2;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Homeobox A3 {ECO:0000313|Ensembl:ENSLACP00000019613.1};
GN Name=HOXA3 {ECO:0000313|Ensembl:ENSLACP00000019613.1};
OS Latimeria chalumnae (Coelacanth).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Coelacanthiformes; Coelacanthidae; Latimeria.
OX NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000019613.1, ECO:0000313|Proteomes:UP000008672};
RN [1] {ECO:0000313|Proteomes:UP000008672}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT "The draft genome of Latimeria chalumnae.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLACP00000019613.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the Antp homeobox family.
CC {ECO:0000256|ARBA:ARBA00009107}.
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DR EMBL; AFYH01044773; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01044774; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01044775; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01044776; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AFYH01044777; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005993141.1; XM_005993079.2.
DR RefSeq; XP_014342193.1; XM_014486707.1.
DR RefSeq; XP_014342195.1; XM_014486709.1.
DR RefSeq; XP_014342196.1; XM_014486710.1.
DR RefSeq; XP_014342197.1; XM_014486711.1.
DR RefSeq; XP_014342198.1; XM_014486712.1.
DR STRING; 7897.ENSLACP00000019613; -.
DR Ensembl; ENSLACT00000019751.1; ENSLACP00000019613.1; ENSLACG00000017247.2.
DR Ensembl; ENSLACT00000026194.1; ENSLACP00000023202.1; ENSLACG00000017247.2.
DR GeneID; 102358212; -.
DR KEGG; lcm:102358212; -.
DR CTD; 3200; -.
DR eggNOG; KOG0489; Eukaryota.
DR GeneTree; ENSGT00940000159522; -.
DR HOGENOM; CLU_051508_1_0_1; -.
DR OMA; PAPLNNC; -.
DR OrthoDB; 728401at2759; -.
DR TreeFam; TF315938; -.
DR Proteomes; UP000008672; Unassembled WGS sequence.
DR Bgee; ENSLACG00000017247; Expressed in post-anal tail muscle and 6 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR025281; DUF4074.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001827; Homeobox_Antennapedia_CS.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR020479; Homeobox_metazoa.
DR PANTHER; PTHR45664:SF13; HOMEOBOX PROTEIN HOX-A3; 1.
DR PANTHER; PTHR45664; PROTEIN ZERKNUELLT 1-RELATED; 1.
DR Pfam; PF13293; DUF4074; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00024; HOMEOBOX.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00032; ANTENNAPEDIA; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 167..227
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 169..228
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 50..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 226..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 370..411
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..127
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..157
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 411 AA; 44924 MW; C107E342B55B2FC3 CRC64;
MQKATYYDSS AIYGGYPYQG ANGFTYNASQ QQYPQSSSLV ESDYHRPACS LQSPASTVPH
HKHNDINESC MRTSNNQPPQ PPGISEHQQT QPPQAPQPTN PVSPSQTSSN NSTPSNSNKN
PGITSPPTIA KQIFPWMKES RQNSKQKNSS CSSGDGCTGD KSPPGPASSK RARTAYTSAQ
LVELEKEFHF NRYLCRPRRV EMANLLNLTE RQIKIWFQNR RMKYKKDQKG KGMMTPSGGQ
SPSRSPIPPH TAGGYLNSMH SLVNSVPYEP QSPPSFGKPH QNAYGLSTSY PAPLNNCPPP
QKRYTGTAAV TPEYDTHPLQ GNGTYGNPHL QASPVYVGGN YVETMGNSGS SIFGLTHLPH
PSTTNMDYSG AGPMASNHHH GPCDPHPTYT DLTSHHPSQG RIQEAPKLTH L
//