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Database: UniProt
Entry: H3GFG4_PHYRM
LinkDB: H3GFG4_PHYRM
Original site: H3GFG4_PHYRM 
ID   H3GFG4_PHYRM            Unreviewed;       544 AA.
AC   H3GFG4;
DT   18-APR-2012, integrated into UniProtKB/TrEMBL.
DT   18-APR-2012, sequence version 1.
DT   27-MAR-2024, entry version 47.
DE   RecName: Full=ubiquitinyl hydrolase 1 {ECO:0000256|ARBA:ARBA00012759};
DE            EC=3.4.19.12 {ECO:0000256|ARBA:ARBA00012759};
OS   Phytophthora ramorum (Sudden oak death agent).
OC   Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC   Phytophthora.
OX   NCBI_TaxID=164328 {ECO:0000313|EnsemblProtists:Phyra74447, ECO:0000313|Proteomes:UP000005238};
RN   [1] {ECO:0000313|Proteomes:UP000005238}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pr102 {ECO:0000313|Proteomes:UP000005238};
RX   PubMed=16946064; DOI=10.1126/science.1128796;
RA   Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H., Aerts A.,
RA   Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J.,
RA   Damasceno C.M., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L.,
RA   Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., Huang W.,
RA   Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., Lee M.K.,
RA   McDonald W.H., Medina M., Meijer H.J., Nordberg E.K., Maclean D.J.,
RA   Ospina-Giraldo M.D., Morris P.F., Phuntumart V., Putnam N.H., Rash S.,
RA   Rose J.K., Sakihama Y., Salamov A.A., Savidor A., Scheuring C.F.,
RA   Smith B.M., Sobral B.W., Terry A., Torto-Alalibo T.A., Win J., Xu Z.,
RA   Zhang H., Grigoriev I.V., Rokhsar D.S., Boore J.L.;
RT   "Phytophthora genome sequences uncover evolutionary origins and mechanisms
RT   of pathogenesis.";
RL   Science 313:1261-1266(2006).
RN   [2] {ECO:0000313|EnsemblProtists:Phyra74447}
RP   IDENTIFICATION.
RC   STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra74447};
RG   EnsemblProtists;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Thiol-dependent hydrolysis of ester, thioester, amide, peptide
CC         and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-
CC         residue protein attached to proteins as an intracellular targeting
CC         signal).; EC=3.4.19.12; Evidence={ECO:0000256|ARBA:ARBA00000707};
CC   -!- SIMILARITY: Belongs to the peptidase C85 family.
CC       {ECO:0000256|ARBA:ARBA00010407}.
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DR   EMBL; DS566005; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; H3GFG4; -.
DR   STRING; 164328.H3GFG4; -.
DR   EnsemblProtists; Phyra74447; Phyra74447; Phyra74447.
DR   VEuPathDB; FungiDB:PSURA_74447; -.
DR   eggNOG; KOG2605; Eukaryota.
DR   HOGENOM; CLU_474502_0_0_1; -.
DR   InParanoid; H3GFG4; -.
DR   OMA; FDEWIPF; -.
DR   Proteomes; UP000005238; Unassembled WGS sequence.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IBA:GO_Central.
DR   GO; GO:0061578; F:K63-linked deubiquitinase activity; IBA:GO_Central.
DR   GO; GO:0019538; P:protein metabolic process; IEA:UniProt.
DR   CDD; cd22752; OTU_OTUD5-like; 1.
DR   Gene3D; 2.30.30.140; -; 1.
DR   Gene3D; 3.90.70.80; -; 1.
DR   InterPro; IPR003323; OTU_dom.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   PANTHER; PTHR12419; OTU DOMAIN CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR12419:SF4; OTU DOMAIN-CONTAINING PROTEIN 5; 1.
DR   Pfam; PF02338; OTU; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR   PROSITE; PS50802; OTU; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005238}.
FT   DOMAIN          220..352
FT                   /note="OTU"
FT                   /evidence="ECO:0000259|PROSITE:PS50802"
FT   REGION          1..33
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          379..410
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        9..33
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   544 AA;  62415 MW;  3C0552006FC2C263 CRC64;
     MVCERPMASP SERSDDPMDG RSRGTSDDSD LEEEMMRVNV FDFEWRRQMH VGDQVDAQNT
     FGNWCPASIL QLADGEVLLQ FLNMNDSWHQ WLQVDSGRLA QPETKARNDS MPIRQAQQIE
     VRPGGTNSSL WKEAFAVKAF GRKVLVRYAG RDQKFDEWVL FSPATVAPAG EHLQLRGRGS
     SLQQRQMVVD APDMTHRRVI QAQNPRFTHY RESLQATLGL QICDIEGDGN CLFRSVSHQV
     YGDDSHHALV RAACMDYMES EKEYFEPYVV GDMAAFMRYL RYKRRDGVWG DDPELQALCE
     LYDRPAEVFA YDPAEGFRKL RCFHENSALS RSRPPIRLSY YGGGHYDSLV GPDHETNLIR
     ETPGQWEQRH IGYSHRINSR ETRNEVASIE QQVQTESDRE RTEVEQLENI LMLSRNEFDA
     MDTSLEETLK KSLAEHGGEG PPAQAHRERA DIEEATRESE MAAIQTELLA KAKAESEDEQ
     MKSVIQASLG DHTLLFKHRL EKGQMSMQQV EPTTTTSKCA ERWNCQRKNT LRQRRISVCT
     GTIR
//
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