ID H3GXJ6_PHYRM Unreviewed; 668 AA.
AC H3GXJ6;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
OS Phytophthora ramorum (Sudden oak death agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=164328 {ECO:0000313|EnsemblProtists:Phyra82330, ECO:0000313|Proteomes:UP000005238};
RN [1] {ECO:0000313|Proteomes:UP000005238}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pr102 {ECO:0000313|Proteomes:UP000005238};
RX PubMed=16946064; DOI=10.1126/science.1128796;
RA Tyler B.M., Tripathy S., Zhang X., Dehal P., Jiang R.H., Aerts A.,
RA Arredondo F.D., Baxter L., Bensasson D., Beynon J.L., Chapman J.,
RA Damasceno C.M., Dorrance A.E., Dou D., Dickerman A.W., Dubchak I.L.,
RA Garbelotto M., Gijzen M., Gordon S.G., Govers F., Grunwald N.J., Huang W.,
RA Ivors K.L., Jones R.W., Kamoun S., Krampis K., Lamour K.H., Lee M.K.,
RA McDonald W.H., Medina M., Meijer H.J., Nordberg E.K., Maclean D.J.,
RA Ospina-Giraldo M.D., Morris P.F., Phuntumart V., Putnam N.H., Rash S.,
RA Rose J.K., Sakihama Y., Salamov A.A., Savidor A., Scheuring C.F.,
RA Smith B.M., Sobral B.W., Terry A., Torto-Alalibo T.A., Win J., Xu Z.,
RA Zhang H., Grigoriev I.V., Rokhsar D.S., Boore J.L.;
RT "Phytophthora genome sequences uncover evolutionary origins and mechanisms
RT of pathogenesis.";
RL Science 313:1261-1266(2006).
RN [2] {ECO:0000313|EnsemblProtists:Phyra82330}
RP IDENTIFICATION.
RC STRAIN=Pr102 {ECO:0000313|EnsemblProtists:Phyra82330};
RG EnsemblProtists;
RL Submitted (JUN-2015) to UniProtKB.
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DR EMBL; DS566067; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; H3GXJ6; -.
DR EnsemblProtists; Phyra82330; Phyra82330; Phyra82330.
DR VEuPathDB; FungiDB:PSURA_82330; -.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_000384_41_1_1; -.
DR InParanoid; H3GXJ6; -.
DR Proteomes; UP000005238; Unassembled WGS sequence.
DR GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR001969; Aspartic_peptidase_AS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR24559:SF438; RT_RNASEH_2 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS00141; ASP_PROTEASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000005238};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 144..159
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 113..139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..139
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 668 AA; 73538 MW; 7FEA5F708F987A1A CRC64;
MEAARTAMRA EAQSVAQANP SGPASYAARQ GTTKPVRMSV PTFDDYVMEL QNLEAAMAGA
PLSEDVKVTA FMDGVRSGPV RTELFRRQPT TFNDAVHIAM LEDHCVRSAQ GYAGRAEATE
DPSPMQISSA ESARPQRNQR ASGRCFGCNQ LGHFRRNCPT NPWKTGRGKA APSLNVIESA
VSENGDSQSV ALPPPPPGEQ VPGTTLLCLS VAAARSNLVV VTASVKGYDE PLKVLIDSGA
SYNFATKASV ARNNALTKTS PLSTGRVAYK AFELRQLTQV KSLELVLAQL RVVERGLPLR
KAFELRQLTQ VKTLELGLAH RHPSDRVVGP TVLDVLTGEY KDGGGLAILP TVAELLELEE
LSYVEFVDSL KVGELEEMVL IRRELDSVEL NTSSVMDPEV LEDERTSSRQ KRYGAAILKD
PSDPYYPLLK EFSDVVSDNP PSVLPPDRGV RHEIDLVPGT KYCTTRQWPL PKEQVDVIDA
FFAAKYAAGM VRESKSPHSS PTFCVRKPNG KWRMVHAFNK LNAATIPAST PISRKDVLQN
NMAGCTIFSA LDMVDGYYQL LMRESDVPLT AVSTPSRMLW EWLVMPQGLS NAPATFNRLV
TQLFRPMRQF VQTYFDDIFV HTRASGVPVN QKDLCKWLGL ANYLHKYSAN NAEMARPLTN
LLKKEAEL
//
