ID H6T2K8_LILSU Unreviewed; 330 AA.
AC H6T2K8;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE AltName: Full=Plastid-encoded RNA polymerase subunit alpha {ECO:0000256|ARBA:ARBA00031776};
DE Flags: Fragment;
GN Name=rpoA {ECO:0000313|EMBL:AEZ49452.1};
OS Lilium superbum (Turk's cap lily) (Lilium canadense subsp. superbum).
OG Plastid {ECO:0000313|EMBL:AEZ49452.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Liliales; Liliaceae; Lilium.
OX NCBI_TaxID=4692 {ECO:0000313|EMBL:AEZ49452.1};
RN [1] {ECO:0000313|EMBL:AEZ49452.1}
RP NUCLEOTIDE SEQUENCE.
RA Givnish T.J., Ames M., McNeal J.R., McKain M.J., Steele P.R.,
RA dePamphilis C.W., Graham S.W., Pires J.C., Stevenson D.W., Zomlefer W.B.,
RA Briggs B.G., Duvall M.R., Moore M.J., Heaney J.M., Soltis D.E.,
RA Soltis P.S., Thiele K., Leebens-Mack J.H.;
RT "Assembling the Tree of the Monocotyledons: Plastome Sequence Phylogeny and
RT Evolution of Poales.";
RL Ann. Mo. Bot. Gard. 97:584-616(2010).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000256|ARBA:ARBA00004026}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
CC -!- SIMILARITY: Belongs to the RNA polymerase alpha chain family.
CC {ECO:0000256|ARBA:ARBA00007123}.
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DR EMBL; HQ182841; AEZ49452.1; -; Genomic_DNA.
DR AlphaFoldDB; H6T2K8; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd06928; RNAP_alpha_NTD; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00059; RNApol_bact_RpoA; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR011773; DNA-dir_RpoA.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR011260; RNAP_asu_C.
DR InterPro; IPR036643; RNApol_insert_sf.
DR NCBIfam; TIGR02027; rpoA; 1.
DR PANTHER; PTHR32108; DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA; 1.
DR PANTHER; PTHR32108:SF0; DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF03118; RNA_pol_A_CTD; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF47789; C-terminal domain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Plastid {ECO:0000313|EMBL:AEZ49452.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 29..232
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT NON_TER 330
FT /evidence="ECO:0000313|EMBL:AEZ49452.1"
SQ SEQUENCE 330 AA; 37781 MW; 01BFC3958ACDACC3 CRC64;
MVREGVGGST RTLQWKCVES KMDSKRLYYG RFILSPLMKG QADTIGIAMR RALLGEIEGT
CITRAKSEKV PHEYSTIVGI KESVHEILIN LKEIVLRSTL YGVRNASICV RGPRHVTAQD
IISPPSVEIV DTTQHIANLT EPIDLCIELQ INRDRGYRMK STNNSQDGSY PIDAIFMPIR
NANHSIHSYR DGNEKQEILF LEIWTNGSLT PKEALYEASR NLIDLFIPFL HAEEEGINFT
ENKNGFTLSP FTFQDRLTNL KKNKKIIPLK FIFIDQLELS SRTYNCLKRS NIHTLLDLLS
NSNSQEDLMR IEYFRIEDVK QILDTLPEAF
//
