ID H6UJ39_CAMSI Unreviewed; 1023 AA.
AC H6UJ39;
DT 18-APR-2012, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=Putative pre-mRNA splicing factor {ECO:0000313|EMBL:AEY85031.1};
OS Camellia sinensis (Tea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; Ericales; Theaceae; Camellia.
OX NCBI_TaxID=4442 {ECO:0000313|EMBL:AEY85031.1};
RN [1] {ECO:0000313|EMBL:AEY85031.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Cold acclimation leaf {ECO:0000313|EMBL:AEY85031.1};
RA Yang Y.J., Wang X.C., Cao H.L., Ma C.L.;
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JN650201; AEY85031.1; -; mRNA.
DR AlphaFoldDB; H6UJ39; -.
DR OrthoDB; 655233at2759; -.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd17039; Ubl_ubiquitin_like; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR010491; PRP1_N.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR PANTHER; PTHR11246:SF1; PRE-MRNA-PROCESSING FACTOR 6; 1.
DR Pfam; PF06424; PRP1_N; 1.
DR Pfam; PF13428; TPR_14; 2.
DR SMART; SM00386; HAT; 14.
DR SMART; SM00028; TPR; 5.
DR SUPFAM; SSF48452; TPR-like; 4.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 1..79
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT REPEAT 783..816
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 115..170
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 283..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 789..843
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1023 AA; 114126 MW; B501ABE14EADBDB5 CRC64;
MVFLKSPDNK TLTLHLDPTT TSLQALHLEI ERKSGVPVTL QRLFLSSRRL IGGDGTATIS
AFGVGLNSTL TLYFPLLGGM QAPVVPKSRL EFLNTKPPPN YVAGLGRGAT GFTTRSDIGP
ARAAPDLPDR SATTIGGAGP AGVGRGRGKG AGEEEEEDET DDKGYDENQK FDEFEGNDVG
LFASAEYDDE DREADAVWDA IDKRMDLRRK DRREARLKQE IEKYRASNPK ITEQFSDLKR
KLYTMSANEW DSIPEIGDYS LRNKKKRFES FVPVPDTLLE KARQEQEHVT ALDPKSRAAG
GTETPWAQTP VTDLTAVGEG RGTVLSLKLD RLSDSVSGLT VVDPKGYLTD LKSMKITSDA
EISDIKKARL LLKSVIQTNP KHPPGWIAAA RLEEVAGKIA AARQLIKKGC EECPKNEDVW
LEACRLSSPD EAKAVIAKGV KAIPNSVKLW MQAAKLEHDD ANKSRVLRKG LEHIPDSVRL
WKAVVELANE EDARLLLQRA VECCPLHVEL WLALARLETY DNAKKVLNKA RERLSKEPAI
WITAAKLEEA NGNTAMVGKI IERGIRALQR EGVVIDREAW MKEAEAAERA GSVATCQAII
HNTIGIGVEE EDRKRTWVAD AEECKKRGSI ETARAIYAHA LTVFLTKKSI WLKAAQLEKS
HGTRESLDAL LRKAVTYRPQ AEVLWLMGAK EKWLAGDVPA ARAILQEAYA AIPNSEEIWL
AAFKLEFENH EPERARMLLA KARERGGTER VWMKSAIVER ELGNTNEERR LLDEGLKLFP
SFFKLWLMLG QLEERLGNLE QAKEAYESGL KHCPSCIPLW LSLANLEEKM NGLSKARAVL
TMARKKNPQN PELWLAAVRA ESRHGYKKEA DILMAKALQE CSNSGILWAA SIEMVPRPQR
KTKSMDALKK LDQDPHVIAA VAKLFWLDRK VDKARNWLNR AVTLAPDIGD YWALYYKFEL
QHGTEENQKD VLKRCIAAEP KHGEKWQAIS KAVENSHQPT EAILKKVVIA LGKEESSAEN
SKH
//
