ID H9TKW0_9ROSI Unreviewed; 224 AA.
AC H9TKW0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=PhyC {ECO:0000313|EMBL:AFG21828.1};
DE Flags: Fragment;
OS Protium subserratum.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Burseraceae; Protium.
OX NCBI_TaxID=246857 {ECO:0000313|EMBL:AFG21828.1};
RN [1] {ECO:0000313|EMBL:AFG21828.1}
RP NUCLEOTIDE SEQUENCE.
RA Fine P.V.A., Zapata F., Daly D.C., Mesones I., Misiewicz T.M., Cooper H.F.,
RA Barbosa C.E.A.;
RT "The importance of environmental heterogeneity and spatial distance in
RT generating phylogeographic structure in edaphic specialist and generalist
RT tree species of Protium (Burseraceae) across the Amazon Basin.";
RL J. Biogeogr. 40:646-661(2013).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JQ307727; AFG21828.1; -; Genomic_DNA.
DR AlphaFoldDB; H9TKW0; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..147
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFG21828.1"
FT NON_TER 224
FT /evidence="ECO:0000313|EMBL:AFG21828.1"
SQ SEQUENCE 224 AA; 25436 MW; 9CB5801C540151EC CRC64;
VYKFHEDEHG EVVAECRRPD LEPYLGLHYP ATDIPQASRF LIMKNKVRMI CDCLSQPVKV
IQDKRLDQPL SLGGSTMRAP HGCHAKYMEN MGSIASLVMS VIINEEDSEL DNDQQQGQKL
WGLVVCHHTS PRFVPFPLRY ACEFLIQVFG VQINKEVELA AQLREKHILQ TQTVLCDMLL
RDSPVGIVTQ SPNVMDLVKC DGAALYYRNK IWSLGVTPTE EQIK
//