ID I0R997_9FIRM Unreviewed; 281 AA.
AC I0R997;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=Ribosome biogenesis GTPase A {ECO:0000256|ARBA:ARBA00014898, ECO:0000256|PIRNR:PIRNR006230};
GN Name=ylqF {ECO:0000313|EMBL:EIC96255.1};
GN ORFNames=HMPREF9970_2181 {ECO:0000313|EMBL:EIC96255.1};
OS Lachnoanaerobaculum saburreum F0468.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Lachnoanaerobaculum.
OX NCBI_TaxID=1095750 {ECO:0000313|EMBL:EIC96255.1, ECO:0000313|Proteomes:UP000005039};
RN [1] {ECO:0000313|EMBL:EIC96255.1, ECO:0000313|Proteomes:UP000005039}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0468 {ECO:0000313|EMBL:EIC96255.1,
RC ECO:0000313|Proteomes:UP000005039};
RA Durkin A.S., McCorrison J., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for a late step of 50S ribosomal subunit assembly.
CC Has GTPase activity. {ECO:0000256|PIRNR:PIRNR006230}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|PIRNR:PIRNR006230}.
CC -!- SIMILARITY: Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1
CC subfamily. {ECO:0000256|PIRNR:PIRNR006230}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIC96255.1}.
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DR EMBL; AJGH01000052; EIC96255.1; -; Genomic_DNA.
DR RefSeq; WP_008753637.1; NZ_AJGH01000052.1.
DR AlphaFoldDB; I0R997; -.
DR PATRIC; fig|1095750.3.peg.1008; -.
DR eggNOG; COG1161; Bacteria.
DR OrthoDB; 9779790at2; -.
DR Proteomes; UP000005039; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR CDD; cd01856; YlqF; 1.
DR Gene3D; 1.10.1580.10; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR030378; G_CP_dom.
DR InterPro; IPR006073; GTP-bd.
DR InterPro; IPR023179; GTP-bd_ortho_bundle_sf.
DR InterPro; IPR019991; GTP-bd_ribosome_bgen.
DR InterPro; IPR016478; GTPase_MTG1.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03596; GTPase_YlqF; 1.
DR PANTHER; PTHR45782; MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1; 1.
DR PANTHER; PTHR45782:SF4; MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1; 1.
DR Pfam; PF01926; MMR_HSR1; 1.
DR PIRSF; PIRSF006230; MG442; 1.
DR PRINTS; PR00326; GTP1OBG.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51721; G_CP; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|PIRNR:PIRNR006230};
KW GTP-binding {ECO:0000256|PIRNR:PIRNR006230, ECO:0000256|PIRSR:PIRSR006230-
KW 1};
KW Nucleotide-binding {ECO:0000256|PIRNR:PIRNR006230,
KW ECO:0000256|PIRSR:PIRSR006230-1}.
FT DOMAIN 10..178
FT /note="CP-type G"
FT /evidence="ECO:0000259|PROSITE:PS51721"
FT BINDING 58..61
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000256|PIRSR:PIRSR006230-1"
FT BINDING 130..135
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000256|PIRSR:PIRSR006230-1"
FT BINDING 174
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000256|PIRSR:PIRSR006230-1"
SQ SEQUENCE 281 AA; 31518 MW; BFD018B5E732247D CRC64;
MKIQWYPGHM TKAKRAMSDV IKLVDIIIEM TDARAPEAGR NPEITELGAD KSRIIILNKA
DLANELANNR WASFYKEQGY ECMFMDSRKN NGVGVLIKAI ENVSKKKRER DAKRGIKNRP
VRAMVAGIPN VGKSTLINSV SGRAMAKTGN KPGVTKGNQW IKLKGQIELL DTPGILWPKF
EDERVGEMIA FIGSINDMII DIRELGLELI KWLLKNKPEV LQERFDIKDG DDENAVLIKI
AKVRGCTKKG GEPDYDKAAT ILVNEFRSGK LGRITLQMPQ E
//
