ID I0UU32_9MICC Unreviewed; 315 AA.
AC I0UU32;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Sugar-binding domain protein {ECO:0000313|EMBL:EID51385.1};
GN ORFNames=HMPREF1324_2144 {ECO:0000313|EMBL:EID51385.1};
OS Rothia aeria F0474.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae;
OC Rothia.
OX NCBI_TaxID=1125724 {ECO:0000313|EMBL:EID51385.1, ECO:0000313|Proteomes:UP000004863};
RN [1] {ECO:0000313|EMBL:EID51385.1, ECO:0000313|Proteomes:UP000004863}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0474 {ECO:0000313|EMBL:EID51385.1,
RC ECO:0000313|Proteomes:UP000004863};
RA Durkin A.S., McCorrison J., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SorC transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00010466}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EID51385.1}.
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DR EMBL; AJJQ01000023; EID51385.1; -; Genomic_DNA.
DR RefSeq; WP_006887875.1; NZ_AJJQ01000023.1.
DR AlphaFoldDB; I0UU32; -.
DR GeneID; 78536377; -.
DR PATRIC; fig|1125724.3.peg.900; -.
DR OrthoDB; 186585at2; -.
DR Proteomes; UP000004863; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 3.40.50.1360; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007324; Sugar-bd_dom_put.
DR PANTHER; PTHR34294; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR PANTHER; PTHR34294:SF1; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR Pfam; PF04198; Sugar-bind; 1.
DR SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT DOMAIN 13..44
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
FT DOMAIN 61..313
FT /note="Sugar-binding"
FT /evidence="ECO:0000259|Pfam:PF04198"
SQ SEQUENCE 315 AA; 34602 MW; BDE07AFD3BC20F24 CRC64;
MNGRINQAYE AAQLYYVQDM TMDGIANRLG VSRATVSRLL KSARETGMVQ IRLDDSFRVR
SELERRISER YKTRVSLVNT RADATPIAVM GQVARTAAQL LDSLIDDGTS VGVAWGATVT
EVSRHLPRRP LNGVKIVQLN GAGNAHHTGI PYLDTLLGRL VTAYDAYIVH FPVPAFFDYA
DTKDAMWRER SVQATLRAQR KVDVALFGIG AFGGAIPSHV YSGGYFDAAA QRTLREQGVV
GDICTILLRE DGSWKDLEMN RRASGPTPTE LTHIPRRLCV ASGVHRAAVL RAALRTGAIT
DLVLDEQLGR ALIEK
//