ID I0WD96_9FLAO Unreviewed; 303 AA.
AC I0WD96;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=Antitermination protein NusB {ECO:0000313|EMBL:EID74362.1};
GN ORFNames=W5A_09009 {ECO:0000313|EMBL:EID74362.1};
OS Imtechella halotolerans K1.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Imtechella.
OX NCBI_TaxID=946077 {ECO:0000313|EMBL:EID74362.1, ECO:0000313|Proteomes:UP000005938};
RN [1] {ECO:0000313|EMBL:EID74362.1, ECO:0000313|Proteomes:UP000005938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K1 {ECO:0000313|EMBL:EID74362.1,
RC ECO:0000313|Proteomes:UP000005938};
RX PubMed=22740661; DOI=10.1128/JB.00506-12;
RA Kumar S., Vikram S., Subramanian S., Raghava G.P., Pinnaka A.K.;
RT "Genome Sequence of the Halotolerant Bacterium Imtechella halotolerans
RT K1T.";
RL J. Bacteriol. 194:3731-3731(2012).
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EID74362.1}.
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DR EMBL; AJJU01000011; EID74362.1; -; Genomic_DNA.
DR AlphaFoldDB; I0WD96; -.
DR STRING; 946077.W5A_09009; -.
DR PATRIC; fig|946077.3.peg.1824; -.
DR eggNOG; COG0781; Bacteria.
DR OrthoDB; 9787568at2; -.
DR Proteomes; UP000005938; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR NCBIfam; TIGR01951; nusB; 1.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000005938};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 194..287
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 303 AA; 35237 MW; AA9F97A5B3960452 CRC64;
MQSIYALHQS KTDSLEKEEK FLLNSIDNMY NLYLLLLSLL VEIRQHGEDQ IVLSQKKYLA
TSEEKNPNRK FIDNKLLRAL AANESLAEVQ EERNIANWKL DDEYVVIIYQ QILASSAYKE
YMSLKETDFD TDRDFIVHIY KEIIATNEKL YEYLEDHKLT WLDDLPSVNT LLLKKLKKAS
ETGAEGYFLP KLYKDEDDRD YAIQLLRKAV LNDEKFQQYI DGKTPNWDAE RIAELDAIII
KMAICEFLKF ASIPVKVTIN EYLEIAKEYS TPKSSIFING ILDKVVKELE ANNSLKKVGR
GLV
//
