ID I0YSP5_COCSC Unreviewed; 448 AA.
AC I0YSP5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=TPR-like protein {ECO:0000313|EMBL:EIE21414.1};
GN ORFNames=COCSUDRAFT_17392 {ECO:0000313|EMBL:EIE21414.1};
OS Coccomyxa subellipsoidea (strain C-169) (Green microalga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Trebouxiophyceae incertae sedis; Elliptochloris clade; Coccomyxa;
OC Coccomyxa subellipsoidea.
OX NCBI_TaxID=574566 {ECO:0000313|EMBL:EIE21414.1, ECO:0000313|Proteomes:UP000007264};
RN [1] {ECO:0000313|EMBL:EIE21414.1, ECO:0000313|Proteomes:UP000007264}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C-169 {ECO:0000313|EMBL:EIE21414.1,
RC ECO:0000313|Proteomes:UP000007264};
RX PubMed=22630137; DOI=10.1186/gb-2012-13-5-r39;
RA Blanc G., Agarkova I., Grimwood J., Kuo A., Brueggeman A., Dunigan D.,
RA Gurnon J., Ladunga I., Lindquist E., Lucas S., Pangilinan J., Proschold T.,
RA Salamov A., Schmutz J., Weeks D., Yamada T., Claverie J.M., Grigoriev I.,
RA Van Etten J., Lomsadze A., Borodovsky M.;
RT "The genome of the polar eukaryotic microalga coccomyxa subellipsoidea
RT reveals traits of cold adaptation.";
RL Genome Biol. 13:R39-R39(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIE21414.1}.
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DR EMBL; AGSI01000012; EIE21414.1; -; Genomic_DNA.
DR RefSeq; XP_005645958.1; XM_005645901.1.
DR AlphaFoldDB; I0YSP5; -.
DR GeneID; 17039398; -.
DR KEGG; csl:COCSUDRAFT_17392; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 311940at2759; -.
DR Proteomes; UP000007264; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47933; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47933:SF2; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2; 1.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007264};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 72..106
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 77..228
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 107..141
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 142..176
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 177..211
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 212..246
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 247..281
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 282..316
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 317..351
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 448 AA; 49415 MW; 708F1A40259088A2 CRC64;
MTVEDLLRIV RSLPPEESAV AAVSRGLFYL DSRALAALLK ELHKVGLSNR ASELFDWLRS
LPDNHELAHL CDVYTYTTII SQCGSHQQLR KALELVAEMR GHGVVCNVHT YSALMNVCIK
ANELELALDV YGQLLREGCT PNLVTYNILI DIHGKMGNWQ EAVQVLDALE DQGTKPEVRT
YNTILSACNR SGQPEHALRV YERMLADGAQ PTATTYTALI SAYGKTGKIE EALRIFQDMV
RRGCERNVIT YSSLISACEK AGRWQLALEL LDEMHRDNCK PNTVTFNALL SACAQGGQWK
AAQDVFEQMP SCGCKPDAVS YAILISAFDR GNQWCRALQA LDEMQGQGHR PDVGVYNVVI
EALTRSGVLS AQLKAAQIFQ AATRQGQLRC DAASANLPLP AIVSKDTVRE EPVMVLLTKH
GDPLYMVDHC PECLESTNPL CSLHVGVT
//
