ID I1BZS4_RHIO9 Unreviewed; 391 AA.
AC I1BZS4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Gypsy retrotransposon integrase-like protein 1 {ECO:0000256|ARBA:ARBA00039658};
GN ORFNames=RO3G_06409 {ECO:0000313|EMBL:EIE81704.1};
OS Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL
OS 43880) (Mucormycosis agent) (Rhizopus arrhizus var. delemar).
OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina;
OC Mucoromycetes; Mucorales; Mucorineae; Rhizopodaceae; Rhizopus.
OX NCBI_TaxID=246409 {ECO:0000313|EMBL:EIE81704.1, ECO:0000313|Proteomes:UP000009138};
RN [1] {ECO:0000313|EMBL:EIE81704.1, ECO:0000313|Proteomes:UP000009138}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880
RC {ECO:0000313|Proteomes:UP000009138};
RX PubMed=19578406; DOI=10.1371/journal.pgen.1000549;
RA Ma L.-J., Ibrahim A.S., Skory C., Grabherr M.G., Burger G., Butler M.,
RA Elias M., Idnurm A., Lang B.F., Sone T., Abe A., Calvo S.E.,
RA Corrochano L.M., Engels R., Fu J., Hansberg W., Kim J.-M., Kodira C.D.,
RA Koehrsen M.J., Liu B., Miranda-Saavedra D., O'Leary S.,
RA Ortiz-Castellanos L., Poulter R., Rodriguez-Romero J., Ruiz-Herrera J.,
RA Shen Y.-Q., Zeng Q., Galagan J., Birren B.W., Cuomo C.A., Wickes B.L.;
RT "Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a
RT whole-genome duplication.";
RL PLoS Genet. 5:E1000549-E1000549(2009).
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DR EMBL; CH476735; EIE81704.1; -; Genomic_DNA.
DR AlphaFoldDB; I1BZS4; -.
DR STRING; 246409.I1BZS4; -.
DR VEuPathDB; FungiDB:RO3G_06409; -.
DR eggNOG; KOG0017; Eukaryota.
DR InParanoid; I1BZS4; -.
DR OMA; INEEQRY; -.
DR OrthoDB; 1355888at2759; -.
DR Proteomes; UP000009138; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47266; ENDONUCLEASE-RELATED; 1.
DR PANTHER; PTHR47266:SF28; GYPSY RETROTRANSPOSON INTEGRASE-LIKE PROTEIN 1; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000009138};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 71..229
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT COILED 268..295
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 391 AA; 46399 MW; 0227735E8D064D02 CRC64;
MNKQEAEEIM YTYHQHPLGG HMAYNNTLHK IASRYYWDNM TKDIMEYVKK CHRCQKYGKK
SLNEELYPMP VSTKPFDRIA LDVKHVQASR AGYRYIIAAI DYLTKYVEAR PIRFQTASEI
SLFLYEEIIC RHGCPTIIIS DNGKPFISKL LQQVCRTYSI IHKTTTPYNP QSNGLIERFN
RTLGQILQKR SVDEKEDWDQ YLPAALFAYR TIKQASTQQT PFFLLYGYEP KTPFDMDYHI
YERNSPKFEA ILKHRTIHQI HNLSNIRKVA AQNIRQTQES QKKQIENKIL DERKELKPPF
RLGDLVLIYK DYLSTSWSAK LQDKWEGPYV VQHILGKGTY HIKSMNPEDT KLRRVHGNRM
KPYQLPKVQW CQENLRHVMT KLDEQTKELF H
//
