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Database: UniProt
Entry: I1DY84_9GAMM
LinkDB: I1DY84_9GAMM
Original site: I1DY84_9GAMM 
ID   I1DY84_9GAMM            Unreviewed;       415 AA.
AC   I1DY84;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:GAB59012.1};
GN   ORFNames=RNAN_2002 {ECO:0000313|EMBL:GAB59012.1};
OS   Rheinheimera nanhaiensis E407-8.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC   Rheinheimera.
OX   NCBI_TaxID=562729 {ECO:0000313|EMBL:GAB59012.1, ECO:0000313|Proteomes:UP000004374};
RN   [1] {ECO:0000313|EMBL:GAB59012.1, ECO:0000313|Proteomes:UP000004374}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=E407-8 {ECO:0000313|EMBL:GAB59012.1,
RC   ECO:0000313|Proteomes:UP000004374};
RX   PubMed=23209246; DOI=10.1128/JB.01922-12;
RA   Zhang X.-Y., Zhang Y.-J., Qin Q.-L., Xie B.-B., Chen X.-L., Zhou B.-C.,
RA   Zhang Y.-Z.;
RT   "Genome Sequence of the Protease-Producing Bacterium Rheinheimera
RT   nanhaiensis E407-8T, Isolated from Deep-Sea Sediment of the South China
RT   Sea.";
RL   J. Bacteriol. 194:7001-7002(2012).
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GAB59012.1}.
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DR   EMBL; BAFK01000009; GAB59012.1; -; Genomic_DNA.
DR   RefSeq; WP_008221239.1; NZ_BAFK01000009.1.
DR   AlphaFoldDB; I1DY84; -.
DR   STRING; 562729.RNAN_2002; -.
DR   OrthoDB; 9796786at2; -.
DR   Proteomes; UP000004374; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.10.2910; -; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF13443; HTH_26; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000004374}.
FT   DOMAIN          79..134
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   415 AA;  46942 MW;  58AD9BA0A8F9C65E CRC64;
     MIYNDQQLRV TSGQLVELKK SLESIEASSS ADVFTQIQLS AISSQIYDLQ KQIDDYNSLL
     TSGPLKVNCS DLSELPFVLV KCRIANFISQ KELAERVGLS ELDIIRFENS KYSGVDQNTL
     MDISKIVGVT ISDQVLTSAS QKGISFNKKP FDWSLFPIKE MAKRGWISLK GNVSPEKQLQ
     EFFFSCGGSN FLAALHKKQI HGGNNPNRYA LIAWQARVLQ KAKLKVDSYE IGKFSLDDSW
     INELIKLSVK DDAPLLVQQL LAKHGIILVV EPHLQGTYLD GAAMLFQDKH PVIALTLRHD
     RLDNFWFALM HELGHVFLHL YTSMFTEFFD EEDQEVGDRF EIEANDYALE NTISKEKWDS
     CLSRFYINEE TVLADATNLG IHPSIVAGRI RKELTNYSIL SSLVGQGKVR LYFGI
//
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