ID I1E159_9GAMM Unreviewed; 706 AA.
AC I1E159;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=General secretion pathway protein D {ECO:0000313|EMBL:GAB60037.1};
GN Name=epsD {ECO:0000313|EMBL:GAB60037.1};
GN ORFNames=RNAN_3050 {ECO:0000313|EMBL:GAB60037.1};
OS Rheinheimera nanhaiensis E407-8.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Rheinheimera.
OX NCBI_TaxID=562729 {ECO:0000313|EMBL:GAB60037.1, ECO:0000313|Proteomes:UP000004374};
RN [1] {ECO:0000313|EMBL:GAB60037.1, ECO:0000313|Proteomes:UP000004374}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=E407-8 {ECO:0000313|EMBL:GAB60037.1,
RC ECO:0000313|Proteomes:UP000004374};
RX PubMed=23209246; DOI=10.1128/JB.01922-12;
RA Zhang X.-Y., Zhang Y.-J., Qin Q.-L., Xie B.-B., Chen X.-L., Zhou B.-C.,
RA Zhang Y.-Z.;
RT "Genome Sequence of the Protease-Producing Bacterium Rheinheimera
RT nanhaiensis E407-8T, Isolated from Deep-Sea Sediment of the South China
RT Sea.";
RL J. Bacteriol. 194:7001-7002(2012).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004442, ECO:0000256|RuleBase:RU004004}.
CC Membrane {ECO:0000256|ARBA:ARBA00004370}.
CC -!- SIMILARITY: Belongs to the bacterial secretin family. GSP D subfamily.
CC {ECO:0000256|ARBA:ARBA00006980}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAB60037.1}.
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DR EMBL; BAFK01000020; GAB60037.1; -; Genomic_DNA.
DR RefSeq; WP_008223229.1; NZ_BAFK01000020.1.
DR AlphaFoldDB; I1E159; -.
DR STRING; 562729.RNAN_3050; -.
DR OrthoDB; 9775455at2; -.
DR Proteomes; UP000004374; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
DR GO; GO:0015628; P:protein secretion by the type II secretion system; IEA:InterPro.
DR Gene3D; 3.30.1370.120; -; 3.
DR InterPro; IPR049371; GspD-like_N0.
DR InterPro; IPR001775; GspD/PilQ.
DR InterPro; IPR005644; NolW-like.
DR InterPro; IPR038591; NolW-like_sf.
DR InterPro; IPR004846; T2SS/T3SS_dom.
DR InterPro; IPR013356; T2SS_GspD.
DR NCBIfam; TIGR02517; type_II_gspD; 1.
DR PANTHER; PTHR30332; PROBABLE GENERAL SECRETION PATHWAY PROTEIN D; 1.
DR PANTHER; PTHR30332:SF24; SECRETIN GSPD-RELATED; 1.
DR Pfam; PF00263; Secretin; 1.
DR Pfam; PF03958; Secretin_N; 3.
DR Pfam; PF21305; type_II_gspD_N0; 1.
DR PRINTS; PR00811; BCTERIALGSPD.
DR PRINTS; PR01032; PHAGEIV.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00022452};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000004374};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|RuleBase:RU004004}.
FT SIGNAL 1..30
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 31..706
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003639699"
FT DOMAIN 43..112
FT /note="GspD-like N0"
FT /evidence="ECO:0000259|Pfam:PF21305"
FT DOMAIN 139..202
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 205..271
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 279..364
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 473..633
FT /note="Type II/III secretion system secretin-like"
FT /evidence="ECO:0000259|Pfam:PF00263"
FT REGION 682..706
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 685..706
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 706 AA; 76618 MW; 9910EE796079C461 CRC64;
MKSGQLSFFS RRTLASLLVA TALTTIIPGA AVVAQEQVMY SPNFKGTDIN EFINIVGMNL
KKTIIVDPQV RGRVNVRSYE MLNEQQYYQF FLNVLEVYGF AVVEMDNGVL KVVRNKDAKT
SNIPVVSDTH PGQGDEMVTR VVQVRNVSVR ELAPLLRQFS NQAGGGHVVN YDPSNVIMMT
GPAAVVNRLV DIIQRVDKAG DQELEIVKLQ YASAPEIVRI LESIYKSQGR AEQPDFLVPR
IVADERTNSV IVSGELQARQ RVIELAKRLD SELQTSGNTR VFYLKYAKAE ELVPVLKGVS
ESIVAEVQGG AAGAQGGRTA AANPGRAISI EAHADSNSLV ITAQPDMMRS LEEVLRQLDI
RRAQVLVEAI IVEVFEGDGT DFGVQWLNAN GGGTNFNNGN TIPIISVAGG AAVASQITRG
SETIVANPGG GSTTTKTPDS NRDYSVLAQV LSGLNGAMLG FYEGDWAAIL QAVRTSTNSN
VLATPHITTM DNQEAFFLVG QEVPVITGST TGSNNTNPFQ QVDRQEVGIK LKVTPQINEG
DAVQLTIEQE VSSIGGATAV DITINKREIK TTVMADDGAT VVLGGLIDED VQESESKVPL
LGDIPILGHL FKSTSVTKQK RNLMVFIKAT IVREGSAISG ISKTKYNYIR AEQLKREEEG
IRLMPNTRQV VLPEWDDSLT LPPTFDEYMN KQGTPEQSTE QPGKQD
//