ID I1GU63_BRADI Unreviewed; 568 AA.
AC I1GU63;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100834287 {ECO:0000313|EnsemblPlants:KQK16111};
GN ORFNames=BRADI_1g26820v3 {ECO:0000313|EMBL:KQK16111.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK16111};
RN [1] {ECO:0000313|EMBL:KQK16111.1, ECO:0000313|EnsemblPlants:KQK16111}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK16111.1,
RC ECO:0000313|EnsemblPlants:KQK16111};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK16111.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK16111.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK16111}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK16111};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; KQK16111.1; -; Genomic_DNA.
DR RefSeq; XP_010238002.1; XM_010239700.2.
DR AlphaFoldDB; I1GU63; -.
DR STRING; 15368.I1GU63; -.
DR EnsemblPlants; KQK16111; KQK16111; BRADI_1g26820v3.
DR GeneID; 100834287; -.
DR Gramene; KQK16111; KQK16111; BRADI_1g26820v3.
DR eggNOG; KOG0828; Eukaryota.
DR HOGENOM; CLU_038877_0_0_1; -.
DR InParanoid; I1GU63; -.
DR OMA; HYVQGSV; -.
DR OrthoDB; 51730at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd23117; RING-H2_TUL1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22763; RING ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR22763:SF165; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT SIGNAL 1..31
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 32..568
FT /note="RING-type domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014094098"
FT TRANSMEM 270..289
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 336..358
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 379..398
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 466..487
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 518..562
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 568 AA; 64350 MW; 40AE8AB35B0863FD CRC64;
MRHAAAAGTV LRVAVVGLVV AGLALPPPAA ALRPLRERVV SAGATASSGS WANEHTFFKR
DDNEMSPYSW NITGTYKGSW SFAGATNGSS RFLEFLTSKG DSVLELLSTP TKISGVHYVQ
GTITFHDVID NTHDRGVAQI RLEGVYIWPF RQLRMVANSG ADGEPLQEED YFLSNPYHLL
RIFSSQVFQD SSEEKNRRKN SLTYDMEKHC NIEIAAKVVR VSSNLNEGEH EKYRLEGLME
SPAVDDDGEC FSSILLNATS LNVEAYYNKA VNYTLMVTFI SFLQVLLLIR QMEHSNTQSG
AAKVSILMIG QQAIMDAYLC LLHLTAGILV ESLFNAFATA AFFKFVVFSI FEMRYLLAIW
KASRPLNSGE GWEIMRRELS VLYSRFYGIL LGGILLMYEL HNFLRPLLFL MYSFWIPQIV
TNVIRDTRKP LHPQYILGMT ATRIAIPLYI FGCPNNFMRI EPDKKWCIAV TVFMGIQAAV
LLLQHYLGSR CFIPRQILPE KYCYHRKVED NTNQPIDCVI CMTTIDLTQR TSEYMVAPCE
HIFHSGCLQR WMDIKMECPT CRRPLPPA
//