ID I1H5J0_BRADI Unreviewed; 865 AA.
AC I1H5J0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
GN Name=100839026 {ECO:0000313|EnsemblPlants:KQK21716};
GN ORFNames=BRADI_1g62590v3 {ECO:0000313|EMBL:KQK21716.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK21716.1};
RN [1] {ECO:0000313|EMBL:KQK21716.1, ECO:0000313|EnsemblPlants:KQK21716}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK21716.1,
RC ECO:0000313|EnsemblPlants:KQK21716};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK21716.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK21716.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK21716}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK21716};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR EMBL; CM000880; KQK21716.1; -; Genomic_DNA.
DR RefSeq; XP_003557925.1; XM_003557877.3.
DR AlphaFoldDB; I1H5J0; -.
DR STRING; 15368.I1H5J0; -.
DR EnsemblPlants; KQK21716; KQK21716; BRADI_1g62590v3.
DR GeneID; 100839026; -.
DR Gramene; KQK21716; KQK21716; BRADI_1g62590v3.
DR KEGG; bdi:100839026; -.
DR eggNOG; KOG1104; Eukaryota.
DR HOGENOM; CLU_013207_1_0_1; -.
DR InParanoid; I1H5J0; -.
DR OMA; CAAEGLM; -.
DR OrthoDB; 5477544at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR ExpressionAtlas; I1H5J0; baseline and differential.
DR GO; GO:0005845; C:mRNA cap binding complex; IBA:GO_Central.
DR GO; GO:0005846; C:nuclear cap binding complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0000339; F:RNA cap binding; IBA:GO_Central.
DR GO; GO:1901527; P:abscisic acid-activated signaling pathway involved in stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0000380; P:alternative mRNA splicing, via spliceosome; IEA:EnsemblPlants.
DR GO; GO:0051607; P:defense response to virus; IEA:EnsemblPlants.
DR GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IBA:GO_Central.
DR GO; GO:0031053; P:primary miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 9..228
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT COILED 643..721
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 865 AA; 98561 MW; 5C8B500A7E4A9C59 CRC64;
MSAGWRTLLL RIGDRCPEYG GSADHKEHIE TCYTVLCREY EHSKDDIFEF LLQCAEQLPH
KIPFFGVLIG LINLENEGFA KGIVDTAQAN LQDALHNENR DRIRILLRFL SGLMCSKVIS
PDSIIETYET LLSSAATILD EEAGNPSWQP RADFYVYCVL ASLPWGGSEL FEQVPDELER
VLVGIQSYIS IRRHFDDIAF SVFETDEGDS PNKKDFMEDL WERIQVLSRN GWKVKSVPKP
HLSFEAQLVV GKSHRFPPVS CPPPTFTLSA SEILKGQEKH EADLKYPQRL RRLHIFPTNK
AENMQPVDRF VVEEYILDVL LFFNGCRKEC AFYLVSLPVP FRYEYLMAET IFSQLLLLPN
PPFRPIYYTL VIIDLCKALP AAFPSVVVAA VHALFDRISN MDTECRTRLI LWFSHHLSNF
QFIWPWQEWA SVKGLPKWAP QRVFVQEVLE REVRLSYFEK IKQSIEDATE LEGLLPPKAG
PNFRYHTDDS KESTEGHRLS KELVGMVRGR KTTRDIISWV EEQIVPANGA KFAIDVVSQT
LLDIGSKSFT HLITVLERYG QIISKLCPDE EMQLLLMDEV SAYWKNSTQM TAIAIDRMMG
YRLISNLAIV KWVFSPANVD QFHVSDRPWE ILRNTVSKTY NRVSDLRKEI QTLRKSIQVA
KEASAKASRE LEEAKSVLEI VEGQPAPSET PGRLRRLQGF ADRAKEEEVA TEESLEAKEA
LLARGLEEGK ELLRLLFKSF VDVLTERLPP ISANGDVPNL RAGDQDVTFA AADPEVATME
IDNENGADND SQLNGKKTKV GYSIGELEQW CLCTLGYLKS FSRQYATEIW SHIAMLDEEV
FVGNIHPLIR KAAFSGLCRP ISERV
//
