ID I1H9L7_BRADI Unreviewed; 551 AA.
AC I1H9L7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=100845331 {ECO:0000313|EnsemblPlants:KQK23594};
GN ORFNames=BRADI_1g74820v3 {ECO:0000313|EMBL:KQK23594.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK23594};
RN [1] {ECO:0000313|EMBL:KQK23594.1, ECO:0000313|EnsemblPlants:KQK23594}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23594.1,
RC ECO:0000313|EnsemblPlants:KQK23594};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK23594.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23594.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK23594}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK23594};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000880; KQK23594.1; -; Genomic_DNA.
DR RefSeq; XP_003558785.1; XM_003558737.3.
DR AlphaFoldDB; I1H9L7; -.
DR STRING; 15368.I1H9L7; -.
DR EnsemblPlants; KQK23594; KQK23594; BRADI_1g74820v3.
DR GeneID; 100845331; -.
DR Gramene; KQK23594; KQK23594; BRADI_1g74820v3.
DR KEGG; bdi:100845331; -.
DR eggNOG; KOG0147; Eukaryota.
DR HOGENOM; CLU_020551_5_0_1; -.
DR InParanoid; I1H9L7; -.
DR OMA; FAGNMIT; -.
DR OrthoDB; 5480707at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:1990446; F:U1 snRNP binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12283; RRM1_RBM39_like; 1.
DR CDD; cd12284; RRM2_RBM23_RBM39; 1.
DR CDD; cd12285; RRM3_RBM39_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR029123; RBM39_linker.
DR InterPro; IPR006509; RBM39_SF.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01622; SF-CC1; 1.
DR PANTHER; PTHR48036; SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED; 1.
DR PANTHER; PTHR48036:SF12; SPLICING FACTOR, CC1-LIKE PROTEIN; 1.
DR Pfam; PF15519; RBM39linker; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 180..257
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 277..355
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 459..542
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 14..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..179
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 551 AA; 62018 MW; 3AC9D4C78C263D50 CRC64;
MDFDEYEYLE KTVEAAAATG NGSAAPRSEG KERSSRRRSS AGDEDRDDGE RRSKRSRSEN
RDRDRDRERE RDRESSRHRS SRERRDRDRD RDEKEKERER EREKEKERER DKEKERRSRD
RDREREKEKE RERRSRSRSE RRRDDDERER HRERDYRDRD VRRRKEDGAE PEADPERDQR
TVFAFQLSLK ADERDVYEFF SRAGKVRDVR LIMDRNSRRS KGVGYIEFYD VMSVPMAIAL
SGQLLLGQPV MVKPSEAEKN LVQSSATSSV AASGGARKLY VGNLHANITE DQLRQVFEPF
GLVELVQLPV DPLTGLCKGF GFVQFARLED AKAAQSLNGQ LDIAGRVIKV SAVTDQAGVQ
VSGATTGDLD DDEGGGLALN ASSRALLMQK LDRSGVTTSL TSGMGAAGLN TSVTLPAVSV
LGAPPAAPAL QPTLTGLGLI PGASVPVISQ PIATAPPSEC LLLKNMFDPA VETDPDFDLD
IKDDVREECS KFGQIRHIFV DKNTAGFVYL RFDSITAAMG AQKALQGRWF AGKMITATFM
SPQQYEAKFP S
//
