ID I1HA03_BRADI Unreviewed; 782 AA.
AC I1HA03;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=BRADI_1g75980v3 {ECO:0000313|EMBL:KQK23768.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK23768.1};
RN [1] {ECO:0000313|EMBL:KQK23768.1, ECO:0000313|EnsemblPlants:KQK23768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23768.1,
RC ECO:0000313|EnsemblPlants:KQK23768};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK23768.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23768.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK23768}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK23768};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; KQK23768.1; -; Genomic_DNA.
DR RefSeq; XP_014752145.1; XM_014896659.1.
DR AlphaFoldDB; I1HA03; -.
DR EnsemblPlants; KQK23768; KQK23768; BRADI_1g75980v3.
DR Gramene; KQK23768; KQK23768; BRADI_1g75980v3.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; I1HA03; -.
DR OMA; VKCCARL; -.
DR OrthoDB; 444797at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 71..105
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 173..203
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 275..309
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 376..410
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 477..511
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 614..648
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 712..782
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 782 AA; 86156 MW; 4CA87F7A46DD4097 CRC64;
MATPLVTSSS SRHAHASSTT YASQHLAAST SKEPPPRVRP KRGPSLKSLV LSHAAAGRMH
DALAAVRSSP DAFLHNVVIR GFADAGLPEA ALAAYRAMLA AGARPDRFTF PVVVKCCARL
GALEEGRAAH SAAIRLGLVG SEVYTGNSLL AFYAKLGMVA DAERVFDGMP VRDIVTWNSM
VDGYVSNGLG ALALDCFREM HEGLQVQHDG VGIIAALAAC CLDSALMQGR EVHAYVIRHG
LEQDVKVGTS LLDMYCKCGA IASAEGMFAT MPSRTVVTWN CMIGGYALNG CPEEAFDCFV
QMKAEGHQVE VVTAINLLAA CAQTESSLYG RSVHGYVTRS QFLPHVVLET ALLEMYSKVG
KVKSSETIFG QMTNKTLVSW NNMIAAYMYK EMYNEAITLF LELLNQPLYP DYFTMSAVVP
AFVLLGLLRQ CRQMHSYIVR LDYGENTLVT NAVMHMYARC GDVVSSRKIF DKMAGKDVIS
WNTIIMGYAI HGQGKIALEM FSEMKSNGLQ PNESTFVSVL TACSVSGMAD EGWIQFNLMQ
RDYGIIPQIE HYGCMTDLLG RAGDLREVLK FIESIPITPT FRIWGSLLTA SRNRNDIDIA
EYAAERIFEL EHDNTGCYVI LSSMYADAGR WEDVQRIRSS MMEKGLRRTD ARSIVELHGS
SCSFVNGDMT HPQSKTIHEV SDVLSRKIGE TDYPRNLSDP ISLTSRRTII PNKHSVRLAV
VFGLISSEAR APILVKKNVR ICNHCHHALK LISKYSRRRI VVGDTNIYHE FLDGSCCCGD
YW
//