ID I1HNG8_BRADI Unreviewed; 428 AA.
AC I1HNG8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN Name=100824690 {ECO:0000313|EnsemblPlants:KQK08266};
GN ORFNames=BRADI_2g40780v3 {ECO:0000313|EMBL:KQK08265.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK08266};
RN [1] {ECO:0000313|EMBL:KQK08265.1, ECO:0000313|EnsemblPlants:KQK08266}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK08265.1,
RC ECO:0000313|EnsemblPlants:KQK08266};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK08265.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK08265.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK08266}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK08266};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DECD subfamily.
CC {ECO:0000256|ARBA:ARBA00038213}.
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DR EMBL; CM000881; KQK08265.1; -; Genomic_DNA.
DR EMBL; CM000881; KQK08266.1; -; Genomic_DNA.
DR RefSeq; XP_010231899.1; XM_010233597.2.
DR RefSeq; XP_010231901.1; XM_010233599.1.
DR AlphaFoldDB; I1HNG8; -.
DR STRING; 15368.I1HNG8; -.
DR EnsemblPlants; KQK08265; KQK08265; BRADI_2g40780v3.
DR EnsemblPlants; KQK08266; KQK08266; BRADI_2g40780v3.
DR GeneID; 100824690; -.
DR Gramene; KQK08265; KQK08265; BRADI_2g40780v3.
DR Gramene; KQK08266; KQK08266; BRADI_2g40780v3.
DR KEGG; bdi:100824690; -.
DR HOGENOM; CLU_003041_1_0_1; -.
DR InParanoid; I1HNG8; -.
DR OrthoDB; 1087080at2759; -.
DR Proteomes; UP000008810; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003724; F:RNA helicase activity; IBA:GO_Central.
DR CDD; cd17950; DEADc_DDX39; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47958; ATP-DEPENDENT RNA HELICASE DBP3; 1.
DR PANTHER; PTHR47958:SF104; ATP-DEPENDENT RNA HELICASE WM6; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 47..75
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 78..251
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 279..424
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT MOTIF 47..75
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
SQ SEQUENCE 428 AA; 48375 MW; 2FA9403233D0A688 CRC64;
MGEAKDNEVY EDDLVDYEEE VENVVDAAAA NPSVDVVKKG YVGIHSSGFR DFLLKPELLR
AIQDCGFEHP SEVQHECIPQ AILGMDVICQ AKSGMGKTAV FVLSTLQQID PVAGQVAALV
LCHTRELAYQ ICHEFERFSK YLSETKVAVF YGGVNIKNHK DLLKNECPHI VVGTPGRILA
LARDKDLSLK NVRHFILDEC DKMLDSLDMR RDVQEIFKMT PHDKQVMMFS ATLSKEIRPV
CKKFMQDPME IYVDDEAKLT LHGLVQHYIK LSEAEKNRKL NDLLDALDFN QIVIFVKSVG
RASELNRLLC ECNFPAICIH SGMTQEERLT RYKNFKEGHK RILVATDLVG RGIDIERVNI
VINYDMPDSA DTYLHRVGRA GRFGTKGLAI TFVSSASDSD VLNQVQERFE VDIKELPEQI
DTSTYMPS
//
