UniProt: I1I9L5

Database: UniProt
Entry: I1I9L5_BRADI

LinkDB:  I1I9L5_BRADI 
Original site:  I1I9L5_BRADI

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Ontology (2)   
   GO (2)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (1)   
   EMBL (1)   
Protein domain (6)   
   InterPro (3)   
   Pfam (2)   
   PROSITE (1)   
Literature (1)   
   PubMed (1)   
All databases (17)   

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ID   I1I9L5_BRADI            Unreviewed;       598 AA.
AC   I1I9L5;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=100834942 {ECO:0000313|EnsemblPlants:KQJ99432};
GN   ORFNames=BRADI_3g43210v3 {ECO:0000313|EMBL:PNT68609.1};
OS   Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX   NCBI_TaxID=15368 {ECO:0000313|EMBL:PNT68609.1};
RN   [1] {ECO:0000313|EMBL:PNT68609.1, ECO:0000313|EnsemblPlants:KQJ99432}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bd21 {ECO:0000313|EMBL:PNT68609.1,
RC   ECO:0000313|EnsemblPlants:KQJ99432};
RX   PubMed=20148030; DOI=10.1038/nature08747;
RG   International Brachypodium Initiative;
RT   "Genome sequencing and analysis of the model grass Brachypodium
RT   distachyon.";
RL   Nature 463:763-768(2010).
RN   [2] {ECO:0000313|EMBL:PNT68609.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Bd21 {ECO:0000313|EMBL:PNT68609.1};
RG   The International Brachypodium Initiative;
RA   Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA   Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA   Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT   "WGS assembly of Brachypodium distachyon.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQJ99432}
RP   IDENTIFICATION.
RC   STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ99432};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
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DR   EMBL; CM000882; KQJ99432.1; -; Genomic_DNA.
DR   EMBL; CM000882; KQJ99433.1; -; Genomic_DNA.
DR   EMBL; CM000882; PNT68604.1; -; Genomic_DNA.
DR   EMBL; CM000882; PNT68609.1; -; Genomic_DNA.
DR   RefSeq; XP_003574958.1; XM_003574910.3.
DR   RefSeq; XP_010235418.1; XM_010237116.2.
DR   RefSeq; XP_014755669.1; XM_014900183.1.
DR   RefSeq; XP_014755670.1; XM_014900184.1.
DR   RefSeq; XP_014755671.1; XM_014900185.1.
DR   AlphaFoldDB; I1I9L5; -.
DR   EnsemblPlants; KQJ99432; KQJ99432; BRADI_3g43210v3.
DR   EnsemblPlants; KQJ99433; KQJ99433; BRADI_3g43210v3.
DR   EnsemblPlants; PNT68604; PNT68604; BRADI_3g43210v3.
DR   EnsemblPlants; PNT68609; PNT68609; BRADI_3g43210v3.
DR   GeneID; 100834942; -.
DR   Gramene; KQJ99432; KQJ99432; BRADI_3g43210v3.
DR   Gramene; KQJ99433; KQJ99433; BRADI_3g43210v3.
DR   Gramene; PNT68604; PNT68604; BRADI_3g43210v3.
DR   Gramene; PNT68609; PNT68609; BRADI_3g43210v3.
DR   KEGG; bdi:100834942; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_10_1; -.
DR   InParanoid; I1I9L5; -.
DR   OMA; MVCANIE; -.
DR   OrthoDB; 456023at2759; -.
DR   Proteomes; UP000008810; Chromosome 3.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR24015:SF856; OS01G0299200 PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF01535; PPR; 6.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          110..144
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          212..246
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          313..347
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          416..450
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   598 AA;  64668 MW;  F90934C0EEF634A8 CRC64;
     MSVAAPTSTL RHWNRLIQLA AASGSYSRCL RHYVPLLAAG LHGDASTFPS LAKSCAALRL
     PRLGCSVHAH ALLVGAASDV FVLTSLLDMY AKCACLPDAR RLFDEMPSPT LISWNCMVTA
     YSKSSCVTEA VAMFNTMRGV GVRPSGATLV GLLSGRVDSL STRNPGLCLY GYSMKSGLDT
     DLPVLNSVLT MLVRAGQLYD ACLLFDSMHE KSVVTWSAMV SGFLQTGDYM KVFGLFNHMQ
     TAGYKFDSVA LVNLISAAVL LGNLLVAKGV HALLIKSGFE SEQDLMSSLV NLYAKCGDLE
     AAQEVFDAVH RKNVVLWTSM ISGYAEGGHP DKALKMFDSM LCTDVEPNEA TVSSVLSACA
     NLGSANQAKK VEDHVVAIGL QKDLRVATGL IDTYCKCGNV TLAREIFDGV TTTNRDLAIW
     SAMINGYACI GEGSEALVLF NEMQNQGVQP DAIVFTHLLT ACNYSGLVDE GLQCFRSLTV
     EYGIEPSIEH YMCTIDLLCK AGHLSAAKEF FRKIPIQLQN QVLAPILTAY SAHCADSSIE
     LVSEELLNLE PHNSDHCVLM ANMLNCLGKW KKATDYRRLI TKQGLVKEPG RSCIEMSG
//

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