ID I1IQ81_BRADI Unreviewed; 936 AA.
AC I1IQ81;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100830141 {ECO:0000313|EnsemblPlants:PNT64614};
GN ORFNames=BRADI_4g30570v3 {ECO:0000313|EMBL:PNT64614.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:PNT64614};
RN [1] {ECO:0000313|EMBL:PNT64614.1, ECO:0000313|EnsemblPlants:PNT64614}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT64614.1,
RC ECO:0000313|EnsemblPlants:PNT64614};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:PNT64614.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT64614.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:PNT64614}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:PNT64614};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000883; PNT64614.1; -; Genomic_DNA.
DR RefSeq; XP_003576535.1; XM_003576487.3.
DR AlphaFoldDB; I1IQ81; -.
DR STRING; 15368.I1IQ81; -.
DR EnsemblPlants; PNT64614; PNT64614; BRADI_4g30570v3.
DR GeneID; 100830141; -.
DR Gramene; PNT64614; PNT64614; BRADI_4g30570v3.
DR KEGG; bdi:100830141; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_011764_0_0_1; -.
DR InParanoid; I1IQ81; -.
DR OMA; DVFSIME; -.
DR OrthoDB; 445621at2759; -.
DR Proteomes; UP000008810; Chromosome 4.
DR GO; GO:0009570; C:chloroplast stroma; IEA:EnsemblPlants.
DR GO; GO:0005675; C:transcription factor TFIIH holo complex; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:EnsemblPlants.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0006281; P:DNA repair; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR47942:SF63; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 8.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 10.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 234..268
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 338..372
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 373..407
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 408..442
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 547..581
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 617..651
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 757..791
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 792..826
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 827..861
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 862..896
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 96..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 936 AA; 104609 MW; 8A4DC70CC47145FF CRC64;
MGLDLFGFSS RVLPGYAADR GHAGGGAAAC HGFFADTRRS GRRSYLRGTL KDAVVCSLED
GGGVAESTTL CISGPSENAS RSGEVAANSG RDVADGIAGT SQRSFAGRKK GGKLWRRPTS
GNKPMRHGAP GRAPGRKDTH GRRIVVNDDD VNAIWSGVSR ESSIEECNSV LIRLEKHSDE
KALGFFVWMK ANGKLEKNVD AYHLALQAIA WKEDWRRAEL LLHEMVAVSG CTLDARAFNG
LIYVCAKRRL VDWGTKWFNM MLDREVQPNV STVGMLMGLY QKTGNLSEAE FTFAKMRECN
VKCINAYSAM ITLYTRSGLF DKSEEVIVLM NDDKVIANLE NWLVQLNAYS QQGKMEEAKL
ILQSMVDEGV SPNVVAFNTL ITGYGKVSDM QKAKEVFNSL EKAGLAPDET TYRSMIEGFG
RADKYDEALL YYRKLKESGF QPNASNFYTM INLIARHDEN ESAAEILKDM MAAGCQCSSI
ITILVRAYAQ VGGMNKVLPI LQSCFYKKIL FDATSCSILV TLFVQNSLLE EALCVLREKK
WKDSDFEDNL YHILVCSCKE AGSYDAAVSI YNEMPKSKLH PNLRISCSMI DVFSTMERFT
DAETLYLELK TSACVLDMIA YSVIVRMYTK AGRPEDACSV LEDMEKQKEI VPDKYLFLDM
LRTYQKCGLL EKLTDTYYWI LKSQVECDEA MNNCIINCCG PAIPVDELTR IFDEMIQLGH
MASTITLNVL LDIYGKAGLF NRAQKVFNMA RKQGQADIIS YNTIIAAYAH SGDFRSMTYF
VQKMQDAGFP VSLEAYNCML NAYGKAGQLE EFAAVLQKMR RAKCDFDHYT YNIMLNIYGR
KGWIEGVAYV LSELKSRGVE PDLYSYNTLI KAYGIAGMPE DAVKLMQEMR LKGINADRIT
YTNLIAALQR NENFLEAVKW SLWMKQTGVG GRGARA
//
