ID I1ISF0_BRADI Unreviewed; 414 AA.
AC I1ISF0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=Ornithine decarboxylase {ECO:0008006|Google:ProtNLM};
GN Name=100843717 {ECO:0000313|EnsemblPlants:KQJ91290};
GN ORFNames=BRADI_4g36870v3 {ECO:0000313|EMBL:KQJ91290.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ91290.1};
RN [1] {ECO:0000313|EMBL:KQJ91290.1, ECO:0000313|EnsemblPlants:KQJ91290}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ91290.1,
RC ECO:0000313|EnsemblPlants:KQJ91290};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ91290.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ91290.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ91290}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ91290};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933,
CC ECO:0000256|PIRSR:PIRSR600183-50};
CC -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family.
CC {ECO:0000256|RuleBase:RU003737}.
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DR EMBL; CM000883; KQJ91290.1; -; Genomic_DNA.
DR RefSeq; XP_003578562.1; XM_003578514.3.
DR AlphaFoldDB; I1ISF0; -.
DR STRING; 15368.I1ISF0; -.
DR EnsemblPlants; KQJ91290; KQJ91290; BRADI_4g36870v3.
DR GeneID; 100843717; -.
DR Gramene; KQJ91290; KQJ91290; BRADI_4g36870v3.
DR KEGG; bdi:100843717; -.
DR eggNOG; KOG0622; Eukaryota.
DR HOGENOM; CLU_026444_1_0_1; -.
DR InParanoid; I1ISF0; -.
DR OMA; MTIACEI; -.
DR OrthoDB; 48358at2759; -.
DR UniPathway; UPA00535; UER00288.
DR Proteomes; UP000008810; Chromosome 4.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0004586; F:ornithine decarboxylase activity; IBA:GO_Central.
DR GO; GO:0033387; P:putrescine biosynthetic process from ornithine; IBA:GO_Central.
DR CDD; cd00622; PLPDE_III_ODC; 1.
DR Gene3D; 3.20.20.10; Alanine racemase; 1.
DR InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR InterPro; IPR022643; De-COase2_C.
DR InterPro; IPR022644; De-COase2_N.
DR InterPro; IPR022653; De-COase2_pyr-phos_BS.
DR InterPro; IPR000183; Orn/DAP/Arg_de-COase.
DR InterPro; IPR002433; Orn_de-COase.
DR InterPro; IPR029066; PLP-binding_barrel.
DR PANTHER; PTHR11482; ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE; 1.
DR PANTHER; PTHR11482:SF62; ORNITHINE DECARBOXYLASE; 1.
DR Pfam; PF02784; Orn_Arg_deC_N; 1.
DR Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR PRINTS; PR01179; ODADCRBXLASE.
DR PRINTS; PR01182; ORNDCRBXLASE.
DR SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR SUPFAM; SSF51419; PLP-binding barrel; 1.
DR PROSITE; PS00878; ODR_DC_2_1; 1.
PE 3: Inferred from homology;
KW Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR600183-50};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 60..292
FT /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02784"
FT DOMAIN 293..388
FT /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00278"
FT ACT_SITE 361
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
FT MOD_RES 83
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
SQ SEQUENCE 414 AA; 43943 MW; EB46D9FC1670D97C CRC64;
MVGSSGPMQA VLTAPGVKDR KVHAFKRDAL KDKDAVAALM HSIAAPAGTA RSAFFVLDLA
RLVDLYSAWR RALPDVRPYY AVKCNPEPAM LGALAALGAG FDCASRAEIE AVLAHGVEPG
SIVYANPCKP EAHLEYAASV GVNLTTYDTE EEVAKVKRCH PDCELLLRIK GPDNDEAKID
LGTKYGAHAE EVVPLLRAAQ RAGLTVAGVS FHVGACTSRT DVYHDAIRAS RAAFDAAAAL
GMPPMRVLDI GGGFMADASF GRAAAAIKDA LAQHFGELLP CVEVIGEPGQ YFGETVFTLA
ARVIGKRARG EARQYWIDDG LYGSLSCALM GDYVPRPRPL LAAPRPGGEK TYASTVFGPT
CDSRDKVVSG YQLPEMSVGD WLVFDGIGAY AASSGSNFNG FLMSDIKTYL AYST
//
