ID I1J3B2_BRADI Unreviewed; 4754 AA.
AC I1J3B2;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100821071 {ECO:0000313|EnsemblPlants:KQJ85267};
GN ORFNames=BRADI_5g26017v3 {ECO:0000313|EMBL:KQJ85267.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ85267.1};
RN [1] {ECO:0000313|EMBL:KQJ85267.1, ECO:0000313|EnsemblPlants:KQJ85267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ85267.1,
RC ECO:0000313|EnsemblPlants:KQJ85267};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ85267.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ85267.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ85267}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ85267};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000884; KQJ85267.1; -; Genomic_DNA.
DR RefSeq; XP_010240604.1; XM_010242302.2.
DR STRING; 15368.I1J3B2; -.
DR EnsemblPlants; KQJ85267; KQJ85267; BRADI_5g26017v3.
DR GeneID; 100821071; -.
DR Gramene; KQJ85267; KQJ85267; BRADI_5g26017v3.
DR KEGG; bdi:100821071; -.
DR eggNOG; ENOG502QQPY; Eukaryota.
DR HOGENOM; CLU_000113_0_0_1; -.
DR InParanoid; I1J3B2; -.
DR OMA; CLDRRVH; -.
DR OrthoDB; 2916270at2759; -.
DR Proteomes; UP000008810; Chromosome 5.
DR ExpressionAtlas; I1J3B2; baseline and differential.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46919; ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN; 1.
DR PANTHER; PTHR46919:SF2; ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 4708..4742
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 4754 AA; 532407 MW; 3136CF7BF2308412 CRC64;
MDPGGGGGGA LLEDFGQRVD LTRRIREVLA NYPEGTTALR ELIQNADDAG ASAVRLCLDR
RSHGARSLLA PALAQWQGPA LLAHNDAVFT DEDFASISRI GDSKKVSQAW KTGRFGVGFN
SVYHLTDLPS FVSGKYVVMF DPQGAYLPNV SAANPGKRID YVTSTAVTLY SDQLSPYRAF
GCDMKAPFQG TLFRFPLRNA EQASSSRLSR QVYTEDDILF LFSQLYEEAV YNLLFLKNVL
ALEMYVWESD MSEPKLVYSC SLGSQDDNLS WHRQALIRFS GNSAESFEQK IDSFSVDFVS
EAFLGKKLEK KSHTYFVVQG MASALSKIGV FATGAAKEYD LHLLPWASVA ACISNVGPED
SNLREGHAFC FLPLPVRTGL SVHVNAYFEV SSNRRDIWYG ADMDRGGKLR SDWNRLLLED
VVAPLFRELL LSLRMLSDST VSYYSLWPTG LYEEPWSILV DQIYKVIYTF PVLQSEIKGG
AWISPAEALV HDEGFSRSND LNEALVLLGM PVVRVPSAVA DMFSKFNTKS MLKRVSPNTV
RHFLQDSVKL GTLGKSHKLI LLEYCLIDLD SADVGKCMNG LPLIPLANKQ YGIFSEILQE
NHYYVCDSIE YELFSAVGDR IIDRSIPPVL LDKLFQIANN SQANISVIDG AVFLQFFPRL
FPPGWKHRNQ VPWDPSLGGS SPTAPWFKLF WQYIVEHSYD LDLFSDWPIL PSLSGHLYRG
STESKLIETE SLSSLVKELL AKLGCKILDT HYLRECQQLS HYVYDGDATG VLHSIFGIVS
LEGVDLHTLF QRITPGEKNE LYQFLLDPKW YLGVCLSDES IKLCKKLPIF RIFDGGSPSS
YGFSDLSHPR KYVPPLGVPE HLLNSDFVFC ISPSNEDIIM RYYGVERMSK SIFYQRYVLN
KLDELQTEVR DSVLLTILQD LPQLSLEDPR FKDCLKVLKF VPTINGALKS PQSLYDPRVE
ELYALLQESD CFPNGLFQNP EVLDMLLCLG LRTSVSIDTI LQSARQIDSL VHKDQEKAHS
RGKVLLSYLE VHAHKWHVNK PLDARKKVNM LAKVTTVLRP RDMSRELDLE KFWSDLRMIC
WCPVLVTAPS PALPWPSVSS MIAPPKQVRM QEDMWIVSAS SRILDGECTS SALSYSLGWS
SPPSGSSIAA QLLELGKNNE VVIDQVLRQE LALVMPKIYS LLTNLIGSDE MDIVKVVLEG
CRWIWVGDGF AKVDEVVLSG HLHLAPYIRV IPIDLAVFKD LFLDLGIKEQ LDTVDYASIL
TRMATRKAAA SLEAEELRTA VLVVQHLAEF RFQDQQTQIY LPDSSARLCL SSELVFNDAP
WLLDFGHEIA GNASTIAFSS KKYVHNFVHG NISNDVAERL GVRSLRRLLL AESSDSMNLS
LSGVAEAFGQ HEDLTTRLKH IVEMYADGPG ILFELVQNAE DAKASEVVFL LDKTQYGTSS
ILSPEMAEWQ GPALYCFNDS VFSPQDLYSI SRIGQDSKLE KPFAIGRFGL GFNCVYHFTD
MPGFVSGENI VMFDPHARYL PGISPSHPGL RIKFVGRRIL EQFPDQFTPF LHFGCNLQQP
FPGTLFRFPL RNEAAASRSQ IKREQYATQD VEMLFSSFSE VVSEALLFLR NVKKITLYVK
ENDSQEMRLV HRVSKHNITQ VSKEPHALNT MLAFVHGNQS SGMNRNNFFN KLNKIKDSDL
PWSCQKVAIL EQSPNAHLVH SWILTECIGG GHARKLSTAS DSKSHFFVPW ASVAAYLHSV
SVDDTKELSG EGEVNHDDLV LKHLALRSSQ DRKFFEGRAF CFLPLPINTS IPVHVNAYFE
LSSNRRDIWT GNDMAGGGRV RSEWNLALLE DVAAPAYGHL LAAIAEELGP SDLFLSFWPT
AVGVEPWSSM VRKLYVSIAE LGLHVLYTKA RGGHWVSTRQ AIFPDFSFSK AIELAEVLSQ
AGLPLVSVSK PIVDSFMNAY PSVHLLNPHL LRNLLIRRKR GFRSREDAIL VLEYCLSDMD
DPTLSDKLQG LALLPLANGS FTTFNNRGEG ERVFFTSQME FDLLKDSIPH LVIDNSLPDG
VLKKLFDMAS SARSNMYLFT CNFLLELLPR ILPPEWQHAK QLSWFPEQQG QPSVEWMILL
WNFLRHSCED LSIFAKWPIL PLVDSKLMQL GNASNVIRGD GWSENMYSLL QKLGCFFLRP
DLQIDHPQLA NFIQESTAAG VLNAVHSVAS DVQDIKQLFE STSLAETHEL RSFIFQSKWF
SGSLINTSHM NTTMNLPIFE SYKSRELVTL TNPRKWLKPD GVHEDLLNES FIRTESEKEK
SILVSYFDVR EPEKAEFYKD HVLPRMSEFL SQPAIVSAIV RDVKVLIEND NSVRDAFSEA
PFVLAASGAW LHPSRLYDPR VPELHKLLHK ETFFPSEKFM TTEIIELLAS FGLKRTFGFS
TLLDIARSVS LVHNSGQEDE AVAHGKMLLT YLNFLEWKTS NMEDENTFHE VDNLEASKID
ENLDAEKKGD GSDPDLTLAS LFSNFDHDLP EHEFWSELKN ISWCPVHVAP LLKGLPWFIS
EGHVAPPVIT RPRSQMWLVS SKMRILSDDS CSMYLQRELG WLDPPNVNIL SSQLVELSKS
YDELKKFSQD TAIDTVMVKE IQLIYSKLQN IVDSDDANIL KENLDGIPWI YVGDRFVPPH
ALAFESPVKY HPYLYAVPSE LSEFKKLLLD LGVRQTFDAM DYLNVLCRLQ GDAKGEPLST
EQLSFVHCVL EAFVDCYPDN QAADVLLNSL VIPDSFGVLT PSRNLVYNDA PWMSTDPTAK
NFVHPSIGND LANRLGVRSL RGSSLLDDEL MRDLPCMEYA KISELLALYG ESDFILFDLI
ELADYCNAKK VHLIYDKRDH PKQSLLQQSL GDLQGSSLTV VFEGTMISRE EICSLQLPPP
WKLRGNTLNY GLGLLSSYFV CDALTILSAG YFYIFDPLGL TGGATSTATS SARFFSLIGN
DLVERFRDQF LPMRVTQEPS LSSANSTVIR MPLSSKCLKE LEAGCNRVKQ IFDRFIQNPS
SALLCLRSVI QVSLSTWENG ASQPTLDYSV LVDPSVATLR KPFSEKKWRK FQISRIFAST
SAAIKMQPID VHVIESGCSY IDKWFVSLCL GSGQTRNMAL DRRYLAYNLT PVAGVAAHIA
RNGVPTNINA SGCILSPLPL SGSISMPVTT LGHFLVRHDS GRYIFGSRHD NSLRELEMNR
KKLVEAWNEE LMLCVRDSYV EMVLEFQKLR KDPQSSAIES RSAHSVSMIL QAYGDRVYSF
WPRSKQHTVS LTGHGSTATN LSSPRTSKED WQSLIEQVIK PFYLRLADLP VWQLYRGNLV
KVDEGMFLSH SGSGDDDNLP SATVCSFIKE HYPVFSVPWE LVSEIQAVGV TVREIRPKMV
RGLLKDSSSV LLRSIETYID VLEYCFSDMD PYRFSDLHRP HESQPNSQLA EPVNYSISNF
MTSSSSSLSY HTSTHRPGAS GGDALEIMTY FGKALYDFGR GVVEDISKTS DPASHRAQTV
ENNVLSSIIS ELKGVPFPTS TKCLARLGVT ELWIGSEEQQ LLMYPLLGHF IHHQCLEKPF
LALLLSTQVI HTPLKLRSFS PHLLSGHLKH IFDERWVHHA VEKKSQWIPW DSNADSSTSG
PTPKWIRSFW KIFSSLNGEL SLLSDWPLIP AFVNRPVLCR VKECHLLFVP PVDDSNAQTL
HVSGVVDDVA GEVDVSGPCG DETGEVEQKS ALCTAFDSMN SKFPWLPALL NQLNIPIFDL
SFPECGAICN LFPSRDRTLG QTIASKLVSA KNNNHLSSSV SLSSEDCDRL LALFVSEFRL
SSNHLYQREE LDVLRELPMY KTVTGTYTSL LGSDHCILSP TAFFHPSDSR CLSSSANANL
FLQALGVEQL NDQEILVRFA LPGFGNKTAQ EKEDILAYLY SNWRDLQLNS AVVNTLRETN
FVINANEFCT ELFKPKELLD PSDALLASVF SGERNKFPAE RFMSDGWLGI LRKAGLRTSI
EADMIVQCAK KIETMGNVVM SSLEDQDDFE ADLSDRKNEI PLELWSLAES VVNVILANFA
TLYDNGFCQK IGEIVFVPAE KGFPSIGGKR GGRRVLASYS EAILSKDWPL AWSSAPILAK
QAIVPPEFSW GAFRLRSPPA FSTVLKHLQS VGRGNGEDTL AHWPSSSGIM TVEDAFLQIL
QYLDKVWGTI SSSERTELQK LAFIPVANGT RLIAVKSLFA RLTIDMSPFA FELPSLYLPF
VAILREIGMQ ESLTNSYARE LLLDIQKACG YQRLNPNELR AVMEILDYMC SGVNQAISDG
SEGLFDSVIP DDGCRLVSAT SCVYIDPYGS HLLSSINTYK IRFAHPDLPR NICKALGIKM
LSDVIVEELD GKEELVVLDS ICSVTLDRIK EKLLCKSLHD ALRIVMIGVA NHFPSFEALN
LVQIESILED ISQNLQFVKH VHTRFLLLPN LQDVTRTAQH PSIAEWSGNG KHRSIYYANK
SMGHILVAEP PSFLTIHDVI AIVVSRRLGA PVILPVASIF ACPDGSEKEV LEILHLGTET
GVSKREGRYD GSLGAELLSQ DARQVQFLPL RPFYSGEIVA WKTGKEGEKI RYGRVPEDVR
PSAGQALYRF PVETAPGETR MLLSSQVYSF KSVSMADLSS AHFQLDGGRV AEVGQQGHTP
INTRTDVVDD MAAGLEYGKV SSMELVQAVH DMLSAAGVRI DAEKETLLQS TLSLQDQLQE
SQVALLVEQE KAESAVREAD VAKAAWSCRV CLNSEVNMTI IPCGHVLCNR CSSSVSRCPF
CRTQVSRLMK IFRP
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