ID I1JIS9_SOYBN Unreviewed; 872 AA.
AC I1JIS9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100814270 {ECO:0000313|EnsemblPlants:KRH73491};
GN ORFNames=GLYMA_02G276200 {ECO:0000313|EMBL:KRH73491.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH73491.1};
RN [1] {ECO:0000313|EMBL:KRH73491.1, ECO:0000313|EnsemblPlants:KRH73491}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH73491};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH73491.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH73491}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH73491};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH73491.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH73491.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000835; KRH73491.1; -; Genomic_DNA.
DR RefSeq; XP_003518473.1; XM_003518425.3.
DR AlphaFoldDB; I1JIS9; -.
DR SMR; I1JIS9; -.
DR STRING; 3847.I1JIS9; -.
DR PaxDb; 3847-GLYMA02G44420-1; -.
DR EnsemblPlants; KRH73491; KRH73491; GLYMA_02G276200.
DR Gramene; KRH73491; KRH73491; GLYMA_02G276200.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; I1JIS9; -.
DR OMA; RWMEAMH; -.
DR OrthoDB; 1381922at2759; -.
DR Proteomes; UP000008827; Chromosome 2.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47939:SF2; FERTILITY RESTORER; 1.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 359..393
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 394..428
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 464..498
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 531..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 600..634
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 669..703
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 842..872
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 872 AA; 99137 MW; 73BD212C8BB53746 CRC64;
MMLPLKQVTK HRLRSKSFIS TVLNPCSSDH AAYTSLASSS PSQSTSSSSA SSSFLISQND
VASSFRSWFA AARKQHQQLP FDPLLNRIHQ ILSSPAGEED FSAALSALRL PLSESLVLRV
LRHGAARRNI LPCLKFFDWA GHQPHFHHTR ATFVAIFQIL ARADLKPLVL DFLDSFRRRI
FHHRVRFHDI LVVGYAIAGK PQNALHAFGR MRFVGLDLDS FAYHVLLDAL VEKNYLNAFD
IIVRQIRSRG YENHMTNVIV VKHLCKERRL EEAEGFLNGL MCRGEELKGP EVSFLVGALC
ESYRFERAFE LVKQFGSSGL VPLDHAYGVW IKGLVRGGRV DEALEFFSQK KDSEGYFPAT
VRYNVLICRL LRENRLREVY DLLVDMSESC IPPDAVTMNA VLCFFCKVGM ADVALELYNS
RSDLELSPNH LACKYLILTL CWDGGAKEAF NVLRSTVDRS YFPDGQTFCT LASALCRERK
IDEMKELLYL AVGRNIVPPT SMYDKYISAL CRAGRVEDGY LVHGELKSVA AKTSYVKMIK
GFVKSGRGDT AARLLVEMNG KGHTPIPRLC RYVICSLLEM DNSRGRFFNL LEMLTRCQHS
CQTYNFFLDG AGHAMKPELA REVFELMQRN GITPNMCSLI LMMNGYLISG RISDALNFFN
DVQRRGLATK KLYVALITGL CKSNKVDISR EYFFRMLRVG LNPSLECYEL LVQKLCSLQR
YSEAMHIINV SQKMGRPVSS FIGNVLLYHS LISPQLYDTC VNLRGVEEGV FSGNSTLCLM
IGAFSGRLRV SHYITDLERL IEKCFPPNIF TYNLLLKQVA RSDMDKARLL FARMCQRGYQ
PNSWTYDIMV RGFSIHGRND EARRWLKEMF RN
//
