ID I1JVW1_SOYBN Unreviewed; 843 AA.
AC I1JVW1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN Name=100810223 {ECO:0000313|EnsemblPlants:KRH62690};
GN ORFNames=GLYMA_04G124300 {ECO:0000313|EMBL:KRH62690.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH62690.1};
RN [1] {ECO:0000313|EMBL:KRH62690.1, ECO:0000313|EnsemblPlants:KRH62690}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH62690};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH62690.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH62690}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH62690};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH62690.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH62690.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
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DR EMBL; CM000837; KRH62690.1; -; Genomic_DNA.
DR RefSeq; XP_006578386.1; XM_006578323.2.
DR AlphaFoldDB; I1JVW1; -.
DR STRING; 3847.I1JVW1; -.
DR PaxDb; 3847-GLYMA04G14850-1; -.
DR EnsemblPlants; KRH62690; KRH62690; GLYMA_04G124300.
DR GeneID; 100810223; -.
DR Gramene; KRH62690; KRH62690; GLYMA_04G124300.
DR eggNOG; ENOG502QPXR; Eukaryota.
DR HOGENOM; CLU_008459_7_1_1; -.
DR InParanoid; I1JVW1; -.
DR OMA; MEFESHS; -.
DR OrthoDB; 1201633at2759; -.
DR Proteomes; UP000008827; Chromosome 4.
DR ExpressionAtlas; I1JVW1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669:SF161; PROTEIN FAR-RED ELONGATED HYPOCOTYL 3; 1.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 568..604
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 132..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 678..727
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 678..707
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 843 AA; 96226 MW; 6C3E062399352071 CRC64;
MDIDLRLPSG EHDKEDEETT TIDNMLDSEE KLHNGGIDGR NIVDTGIEVH ALNGGDLNSP
TVDIVMFKED TNLEPLSGME FESHGEAYSF YQEYARSMGF NTAIQNSRRS KTSREFIDAK
FACSRYGTKR EYDKSFNRPR ARQNKQDSEN STGRRSCSKT DCKASMHVKR RSDGKWVIHS
FVKEHNHELL PAQAVSEQTR RMYAAMARQF AEYKTVVGLK NEKNPFDKGR NLGLESGEAR
LMLDFFIQMQ NMNSNFFYAV DLGEDQRLKN LLWIDAKSRN DYINFCDVVS FDTAYVRNKY
KMPLALFVGV NQHYQFTLLG CALISDESAA TFSWLFRTWL KGVGGQVPKV IITDHDKTLK
SVISDIFPNS SHCVCLWHIL GKVSENLSPV IKKHENFMAK FEKCIYRSLT SDDFEKRWWK
IVDKFELRED ECMQSLYEDR KLWAPTFMKD VFLGGMSTVQ RSESVNSFFD KYVHKKTSVQ
DFVKQYEAIL QDRYEEEAKA DSDTWNKVAT LKTPSPLEKS VAGIFSHAVF KKIQTEVVGA
VACHPKADRQ DDTTIVHRVH DMETNKDFFV VVNQVKSELS CICRLFEYRG YLCRHALFVL
QYSGQSVFPS QYILKRWTKD AKVRNIMGEE SEHMLTRVQR YNDLCQRALK LSEEGSLSQE
SYGIAFHALH EAHKSCVSVN NSSKSSPTEA GTPGAHGQLS TEEDTQSRNM GKSNKKKHPT
KKKKVNSEAE VITVGALDNL QQMDKFSTRA VTLEGYYGTQ QSVQGMLNLM GPTRDDYYGN
QQTLQGLGPI SSIPTSHDGY YGTHQGMPGL AQLDFLRTGF TYGIRDDPNV RATQLHEDPS
RHA
//
