ID I1JYJ6_SOYBN Unreviewed; 257 AA.
AC I1JYJ6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=100788634 {ECO:0000313|EnsemblPlants:KRH64318};
GN ORFNames=GLYMA_04G229600 {ECO:0000313|EMBL:KRH64318.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH64318};
RN [1] {ECO:0000313|EMBL:KRH64318.1, ECO:0000313|EnsemblPlants:KRH64318}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH64318};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH64318.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH64318}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH64318};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH64318.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH64318.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000837; KRH64318.1; -; Genomic_DNA.
DR RefSeq; XP_006577816.1; XM_006577753.2.
DR AlphaFoldDB; I1JYJ6; -.
DR SMR; I1JYJ6; -.
DR STRING; 3847.I1JYJ6; -.
DR PaxDb; 3847-GLYMA04G40770-1; -.
DR EnsemblPlants; KRH64318; KRH64318; GLYMA_04G229600.
DR Gramene; KRH64318; KRH64318; GLYMA_04G229600.
DR eggNOG; KOG0149; Eukaryota.
DR HOGENOM; CLU_048669_1_1_1; -.
DR InParanoid; I1JYJ6; -.
DR OMA; WETKRDS; -.
DR OrthoDB; 418137at2759; -.
DR Proteomes; UP000008827; Chromosome 4.
DR ExpressionAtlas; I1JYJ6; baseline and differential.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12384; RRM_RBM24_RBM38_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR11176; BOULE-RELATED; 1.
DR PANTHER; PTHR11176:SF55; RNA-BINDING (RRM_RBD_RNP MOTIF) FAMILY PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 24..101
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 227..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 257 AA; 28569 MW; A8F2581CCCF379EB CRC64;
MSQPRQNKMM SPNLAKQVGD ATYTKIFVGG LAWGTKRDTL KRYFDQFGEI LEAVVITDKI
TGRSKGYGFV TFRDPNSAIR ACHNPYPVID GRRANCNLAA LGAQKFDPSI TGRQKLSSPS
WNMAPIPLQG TSTYYNQHIP HYPFPYPAYS PTFRYPGYPH PQDLYEMNYN NAYGGQQLPL
RWLPAYCQPF YGLGRQFIPT AYVKKAQTPN MSPQEFTVVG FSEPISASPS ISSTGLDTGT
VPATGVLESP QEQKSST
//
