ID I1K3J0_SOYBN Unreviewed; 662 AA.
AC I1K3J0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Signal recognition particle subunit SRP72 {ECO:0000256|ARBA:ARBA00018350, ECO:0000256|PIRNR:PIRNR038922};
GN Name=100791472 {ECO:0000313|EnsemblPlants:KRH58730};
GN ORFNames=GLYMA_05G144700 {ECO:0000313|EMBL:KRH58730.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH58730};
RN [1] {ECO:0000313|EMBL:KRH58730.1, ECO:0000313|EnsemblPlants:KRH58730}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH58730};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH58730.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH58730}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH58730};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH58730.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH58730.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the signal recognition particle (SRP) complex, a
CC ribonucleoprotein complex that mediates the cotranslational targeting
CC of secretory and membrane proteins to the endoplasmic reticulum (ER).
CC {ECO:0000256|PIRNR:PIRNR038922}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496,
CC ECO:0000256|PIRNR:PIRNR038922}. Endoplasmic reticulum
CC {ECO:0000256|ARBA:ARBA00004240}.
CC -!- SIMILARITY: Belongs to the SRP72 family.
CC {ECO:0000256|ARBA:ARBA00007676, ECO:0000256|PIRNR:PIRNR038922}.
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DR EMBL; CM000838; KRH58730.1; -; Genomic_DNA.
DR RefSeq; XP_003524881.1; XM_003524833.3.
DR AlphaFoldDB; I1K3J0; -.
DR SMR; I1K3J0; -.
DR STRING; 3847.I1K3J0; -.
DR PaxDb; 3847-GLYMA05G27690-1; -.
DR EnsemblPlants; KRH58730; KRH58730; GLYMA_05G144700.
DR GeneID; 100791472; -.
DR Gramene; KRH58730; KRH58730; GLYMA_05G144700.
DR KEGG; gmx:100791472; -.
DR eggNOG; KOG2376; Eukaryota.
DR HOGENOM; CLU_013808_2_0_1; -.
DR InParanoid; I1K3J0; -.
DR OMA; ELACNER; -.
DR OrthoDB; 91080at2759; -.
DR Proteomes; UP000008827; Chromosome 5.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IBA:GO_Central.
DR GO; GO:0008312; F:7S RNA binding; IBA:GO_Central.
DR GO; GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR013699; Signal_recog_part_SRP72_RNA-bd.
DR InterPro; IPR026270; SRP72.
DR InterPro; IPR031545; SRP72_TPR-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR14094; SIGNAL RECOGNITION PARTICLE 72; 1.
DR PANTHER; PTHR14094:SF9; SIGNAL RECOGNITION PARTICLE SUBUNIT SRP72; 1.
DR Pfam; PF08492; SRP72; 1.
DR Pfam; PF17004; SRP_TPR_like; 1.
DR PIRSF; PIRSF038922; SRP72; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|PIRNR:PIRNR038922};
KW Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|PIRNR:PIRNR038922};
KW Signal recognition particle {ECO:0000256|ARBA:ARBA00023135,
KW ECO:0000256|PIRNR:PIRNR038922}.
FT DOMAIN 550..598
FT /note="Signal recognition particle SRP72 subunit RNA-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF08492"
FT REGION 547..662
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 621..651
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 662 AA; 73133 MW; A79BF92225E70906 CRC64;
MAPKPKPAPS QPAPPPALED LFTTLNRHIQ ASAYDNAVRL TDQILAIAPG DEDALRCKVV
ALIKNDRVED TLSAIRSSKK QLDDFHFLKA YCLYRQNKLD EALESLKRQE SNDETMLLEC
QILYRLGKMD ACLDIYRKLQ NSKIDNMEIN SVAALVMSGR SSEVQGMLDS LRVKATSSFE
LAYNTACSLI ARNEYTDAEQ LLLSGRRIGQ EVLMEDNLAD DEIEIELSPI AVQLAYVQQL
LGRKQDAIEA YTDVIKRDMA DESSIAVAVN NLVSLKGPKD VSDSLRKLDR LKDKENQSFR
LAPGLDLKLS AKEKEAIYAN RVLLLLHANK NEQARELVSA LPDMFPESVI PIFLQAALLV
RENKAGRAEE ILAQFASKFP DKSKVVHLAR AQVAAAAGHP HIAADSLTKI SDIQHMPATV
ATLVSLKERA GDIDGAAAVL DNATKWWSNA MTEDNKLNTI TQEAALFKLR HGKEEEAAQL
YEQLVKSQGS IEALVGLVTT VARMDVAKAE LYEKQLNALP GLKGIDVDSL ERTSGVKQVD
APRVGVAETY EEGKNKTKSK KKRKRKPRYP KGFDPANPGP PPDPERWLPK RERSTYRPKR
KDKRAAQVRG SQGAVVRDKH DTGASSNSSN LKSNQGTSKG AAQNAVSEQT KPSSKSRKKS
RN
//
