ID I1KKP3_SOYBN Unreviewed; 577 AA.
AC I1KKP3;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100790651 {ECO:0000313|EnsemblPlants:KRH49526};
GN ORFNames=GLYMA_07G161500 {ECO:0000313|EMBL:KRH49526.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH49526};
RN [1] {ECO:0000313|EMBL:KRH49526.1, ECO:0000313|EnsemblPlants:KRH49526}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH49526};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH49526.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH49526}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH49526};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH49526.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH49526.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000840; KRH49526.1; -; Genomic_DNA.
DR RefSeq; XP_003530332.1; XM_003530284.3.
DR RefSeq; XP_006583703.1; XM_006583640.2.
DR AlphaFoldDB; I1KKP3; -.
DR SMR; I1KKP3; -.
DR PaxDb; 3847-GLYMA07G20580-2; -.
DR EnsemblPlants; KRH49526; KRH49526; GLYMA_07G161500.
DR GeneID; 100790651; -.
DR Gramene; KRH49526; KRH49526; GLYMA_07G161500.
DR KEGG; gmx:100790651; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; I1KKP3; -.
DR OMA; RFFHWLC; -.
DR OrthoDB; 465408at2759; -.
DR Proteomes; UP000008827; Chromosome 7.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR45613:SF476; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 176..210
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 248..282
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 317..351
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 352..386
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 422..456
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 457..491
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 577 AA; 66327 MW; 3ED5904EE53C19FA CRC64;
MLMVRRTPSY SLVTFYVRRS IAQFRNLTSE TKNGDHEHPT KALDAKDCNF VYEICRITRT
KPRWEDTLLS QYPSFNFKDP SFFLLYLKHQ NNAFLSLRFF HWLCSSCGFS PDQSSCNVLF
QVLVDAGAGK LAKSLLDSPG FTPEPASLEG YIQCLSGAGM VEDAVDMLKR VVFCPSVATW
NASLLGCLRA RRTDLVWTLY EQMMESGVVA SINVETVGYL IMAFCAEYKV LKGYELLKEL
LENGLCPDNV VFNELIRGFC KEGQYDRVSE ILHIMIAKQC NPDVSTYQEI IYGLLKMKNS
EGFQVFNDLK DRGYFPDRVM YTTVIKGLCE MQRLGEARKL WFEMIKKGFQ PNEYTYNVMM
HGYCKIGDLA EARKIFEDMR DRGYAETTVS YGTMISGLCL HGRTDEAQSL FEEMFQKGIV
PDLITYNCLI KALCKEVKIV KARKLLNLLL AQGLELSVFS FSPLIKQLCI VGNTKGAITL
WKDMHDRLLE PTASIFGIEW LLNMLSWKQK PQKQTFEYLI NSLSQENRLD DILVVLDFMF
RIGYILEKGT IYSLVSKFSR DNFHFPDLCL EKILERN
//
