ID I1L3L0_SOYBN Unreviewed; 525 AA.
AC I1L3L0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=GLYMA_09G154200 {ECO:0000313|EMBL:KRH38731.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH38731};
RN [1] {ECO:0000313|EMBL:KRH38731.1, ECO:0000313|EnsemblPlants:KRH38731}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH38731};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH38731.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH38731}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH38731};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH38731.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH38731.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM000842; KRH38731.1; -; Genomic_DNA.
DR AlphaFoldDB; I1L3L0; -.
DR SMR; I1L3L0; -.
DR PaxDb; 3847-GLYMA09G28150-1; -.
DR EnsemblPlants; KRH38731; KRH38731; GLYMA_09G154200.
DR Gramene; KRH38731; KRH38731; GLYMA_09G154200.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_1_1; -.
DR InParanoid; I1L3L0; -.
DR OMA; FLEMTIK; -.
DR Proteomes; UP000008827; Chromosome 9.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47928:SF65; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 128..162
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 435..525
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 525 AA; 59664 MW; 0C4DBE6488B8E51C CRC64;
MMRFYNSTSA KPFHSDHYSR LVSLIETCIV QQIKQTHAQL ITTALISHPV SANKLHKLAA
CASLFYAHKL FDQIPHPDLF IYNAMIRAHS LLPHSCHISL VVFRSLTWDS GRLVEESQKV
FQWAVDRDLY SWNTMISTYV GSGNMSQAKE LFDGMQERNV VSWSTIIAGY VQVGCFMEAL
GFFHEMLQIG PKPNEYTLVS TLAACSNLVA LDKGKWFHAY IGRGDIKMNE RLLASIIGMY
AKCGEIESAS RVFLEHRAID VFEQMKVEKV SPNKVAFIAL LNACSHGYMV EEGNLCFRLM
VSDYAITPEI VHYGCMVLSR SGLLKEAEDM ISSMPMAPNV AIWGALLNAC RIYKDVERGY
RIGRIIEDMD PNHIGCHVLL SNIYSTSRRW NEARMLREKN KISRDRKKIS GCSSIELKGT
FHQFLEMTIK LKSAGYVPEL GELLHDIDDE EDRVCFVCTQ KLAIAFGLMN TANGTPIRIV
KNLRVCGDCH QATKFISKVY NRVIIARDRT RYHRFKDGIC SCEDY
//
