ID I1L7N5_SOYBN Unreviewed; 476 AA.
AC I1L7N5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100781679 {ECO:0000313|EnsemblPlants:KRH31780};
GN ORFNames=GLYMA_10G011800 {ECO:0000313|EMBL:KRH31780.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH31780.1};
RN [1] {ECO:0000313|EMBL:KRH31780.1, ECO:0000313|EnsemblPlants:KRH31780}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH31780};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH31780.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH31780}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH31780};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH31780.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH31780.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000843; KRH31780.1; -; Genomic_DNA.
DR RefSeq; XP_014618366.1; XM_014762880.1.
DR AlphaFoldDB; I1L7N5; -.
DR SMR; I1L7N5; -.
DR STRING; 3847.I1L7N5; -.
DR PaxDb; 3847-GLYMA10G01500-1; -.
DR EnsemblPlants; KRH31780; KRH31780; GLYMA_10G011800.
DR GeneID; 100781679; -.
DR Gramene; KRH31780; KRH31780; GLYMA_10G011800.
DR KEGG; gmx:100781679; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_019802_2_0_1; -.
DR InParanoid; I1L7N5; -.
DR OMA; CELFLEH; -.
DR OrthoDB; 471757at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR ExpressionAtlas; I1L7N5; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR45717:SF8; OS01G0301500 PROTEIN; 1.
DR PANTHER; PTHR45717; OS12G0527900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 127..161
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 455..476
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 460..476
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 476 AA; 54626 MW; 6EB67001AB4FE121 CRC64;
MNYARLISGG GWLLRRLCTA AETPAKKPNL YRMLSALDIT GGTVSQTLDQ YIMEGKVIKK
PELERCVEQL RKYRRFQHAL EIIEWMEIRK VNFSWSNYAV QLDLVSKTKG VDAAENFFGG
LPPPAKNRYT YGALLNCYCK ELMKDKALSH FDTMDELGYV TNLAFNNVMT LFMKLGEPQK
VPQLVELMKK RTIPMSPFTY HIWMNSCASS NDLGGAERVY EEMKTENEGQ IGWHTYSNLA
SIYVKFKDFE KAEMMLKMLE EQVKPKQRDA YHCLLGLYAG TGNLGEVHRV WDSLKSVSPV
TNFSYLVMLS TLRRLNDMEG LTKCFKEWEA SCVSYDARLV SVCVSAHLNQ NMLEEAELVF
EEASRRSKGP FFRVREEFMK FFLKKHELDA AVRHLEAALS EVKGDKWRPS PQVVGAFLKY
YEEETDVDGV DELSKILKAN NFDDSWIKSC ITASKSSPEI DPGMKEDSQV YHAQEN
//