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Database: UniProt
Entry: I1LI24_SOYBN
LinkDB: I1LI24_SOYBN
Original site: I1LI24_SOYBN 
ID   I1LI24_SOYBN            Unreviewed;       405 AA.
AC   I1LI24;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 63.
DE   RecName: Full=VWFA domain-containing protein {ECO:0000259|PROSITE:PS50234};
GN   ORFNames=GLYMA_11G078100 {ECO:0000313|EMBL:KRH28809.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC   Glycine subgen. Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH28809};
RN   [1] {ECO:0000313|EMBL:KRH28809.1, ECO:0000313|EnsemblPlants:KRH28809}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH28809};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH28809.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA   Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA   Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R.C., Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH28809}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH28809};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH28809.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH28809.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA   Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA   Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA   Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA   Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA   Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA   Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA   Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the proteasome subunit S5A family.
CC       {ECO:0000256|ARBA:ARBA00005574}.
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DR   EMBL; CM000844; KRH28809.1; -; Genomic_DNA.
DR   AlphaFoldDB; I1LI24; -.
DR   SMR; I1LI24; -.
DR   STRING; 3847.I1LI24; -.
DR   PaxDb; 3847-GLYMA11G08290-1; -.
DR   EnsemblPlants; KRH28809; KRH28809; GLYMA_11G078100.
DR   Gramene; KRH28809; KRH28809; GLYMA_11G078100.
DR   eggNOG; KOG2884; Eukaryota.
DR   HOGENOM; CLU_033293_0_0_1; -.
DR   InParanoid; I1LI24; -.
DR   OMA; SSAMDTC; -.
DR   Proteomes; UP000008827; Chromosome 11.
DR   ExpressionAtlas; I1LI24; baseline and differential.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0008540; C:proteasome regulatory particle, base subcomplex; IBA:GO_Central.
DR   GO; GO:0031593; F:polyubiquitin modification-dependent protein binding; IBA:GO_Central.
DR   GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   CDD; cd22297; PSMD4_RAZUL; 1.
DR   CDD; cd01452; VWA_26S_proteasome_subunit; 1.
DR   Gene3D; 1.10.287.3990; -; 1.
DR   Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR   InterPro; IPR027040; PSMD4.
DR   InterPro; IPR003903; UIM_dom.
DR   InterPro; IPR002035; VWF_A.
DR   InterPro; IPR036465; vWFA_dom_sf.
DR   PANTHER; PTHR10223; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; 1.
DR   PANTHER; PTHR10223:SF0; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; 1.
DR   Pfam; PF02809; UIM; 3.
DR   Pfam; PF13519; VWA_2; 1.
DR   SMART; SM00726; UIM; 3.
DR   SMART; SM00327; VWA; 1.
DR   SUPFAM; SSF53300; vWA-like; 1.
DR   PROSITE; PS50330; UIM; 1.
DR   PROSITE; PS50234; VWFA; 1.
PE   3: Inferred from homology;
KW   Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT   DOMAIN          5..189
FT                   /note="VWFA"
FT                   /evidence="ECO:0000259|PROSITE:PS50234"
FT   REGION          242..287
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          365..405
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        242..258
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        259..284
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        379..393
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   405 AA;  42892 MW;  7803EC7A0DC473DC CRC64;
     MVLEATMICI DNSEWMRNGD YSPSRFQAQA DAVNLICGAK TQSNPENTVG VLTMAGKGVR
     VLVTPTSDLG KILACMHGLD IGGEMNLAAG IQVAQLALKH RQNKKQQQRI IVFAGSPVKH
     EKKMLEMIGR KLKKNSVALD IVNFGEEDEG KTEKLEALLA AVNNNDTSHI VHVPSGPNAL
     SDVLISTPIF TGDGEGGSGF AAAAATAAAG GVSGFEFGVD PNLDPELALA LRVSMEEERA
     RQEAAAKKAA EDAANLEKGD EQQASSQHAT MTERAGAATS EAENKTSDLM DDENALLQQA
     LAMSMDDSAI SHDVKDTDMS EASASDPDLA LALQLSITDS AKDQSSQSDM SKLLADQSFV
     SSILASLPGV DPNDPSVKDL LASMQNQSEP QQKNDDKPSN EEEKK
//
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