ID I1LU02_SOYBN Unreviewed; 493 AA.
AC I1LU02;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=102664218 {ECO:0000313|EnsemblPlants:KRH26694};
GN ORFNames=GLYMA_12G189100 {ECO:0000313|EMBL:KRH26694.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH26694.1};
RN [1] {ECO:0000313|EMBL:KRH26694.1, ECO:0000313|EnsemblPlants:KRH26694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH26694};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH26694.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH26694}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH26694};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH26694.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH26694.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000845; KRH26694.1; -; Genomic_DNA.
DR RefSeq; XP_006592780.1; XM_006592717.2.
DR AlphaFoldDB; I1LU02; -.
DR SMR; I1LU02; -.
DR STRING; 3847.I1LU02; -.
DR PaxDb; 3847-GLYMA12G31510-1; -.
DR EnsemblPlants; KRH26694; KRH26694; GLYMA_12G189100.
DR GeneID; 102664218; -.
DR Gramene; KRH26694; KRH26694; GLYMA_12G189100.
DR KEGG; gmx:102664218; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR InParanoid; I1LU02; -.
DR OMA; NARKGMI; -.
DR OrthoDB; 1203783at2759; -.
DR Proteomes; UP000008827; Chromosome 12.
DR ExpressionAtlas; I1LU02; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0080156; P:mitochondrial mRNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 1.
DR PANTHER; PTHR47928:SF14; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 301..335
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 336..371
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 493 AA; 55393 MW; 75AEAC80E80A26F9 CRC64;
MKVRHKTLKH QNQDIIYLML NCLPRFRCIS FLYSLPKLSY NIKQIHAQLI TNGLKYPTFW
AKLIEHYCGS PDQHIANNAR LVFQYFDKPD LFLFNTLIRC VQPNDSILIF RNEFSRGLMF
FDEYTYNFVL GACARSPSAS TLWVGRQLHA LIVKHGVESN IVVPTTKVYF YASNKDIISS
RKVFDEMPRR STVTWNAMIT GYSSLKEGNK KYALNALYLF IDMLIDVSGI KPTATTIVSV
LSAVSQIGML ETGACIHGFA EKTVCTPEDD VFIGTGLVDM YSKCGCLDSA LSVFWRMNQK
NIMTWTAMTT GLAIHGKGKQ SLEVLYKMGA YGVKPNEATF TSFLSACCHG GLVEEGLQLF
LEMKRTFGVM PQIQHYGCIV DLLGRAGKLE EAYDFIMQMP INPDAVIWRS LLAACNIHGD
VVMGEKVGKF LLQLEEWSSA ESPKSEDYIA LSNVYALAEK WDDVETVRIK MKAKSILNKA
GSSAVQTVSM AVL
//
