ID I1MBZ0_SOYBN Unreviewed; 549 AA.
AC I1MBZ0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=4-coumarate--CoA ligase-like 5 {ECO:0008006|Google:ProtNLM};
GN Name=100811344 {ECO:0000313|EnsemblPlants:KRH17509};
GN ORFNames=GLYMA_14G223200 {ECO:0000313|EMBL:KRH17509.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH17509};
RN [1] {ECO:0000313|EMBL:KRH17509.1, ECO:0000313|EnsemblPlants:KRH17509}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH17509};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH17509.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH17509}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH17509};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH17509.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH17509.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000847; KRH17509.1; -; Genomic_DNA.
DR RefSeq; XP_003545004.1; XM_003544956.3.
DR AlphaFoldDB; I1MBZ0; -.
DR SMR; I1MBZ0; -.
DR STRING; 3847.I1MBZ0; -.
DR PaxDb; 3847-GLYMA14G39840-1; -.
DR EnsemblPlants; KRH17509; KRH17509; GLYMA_14G223200.
DR GeneID; 100811344; -.
DR Gramene; KRH17509; KRH17509; GLYMA_14G223200.
DR KEGG; gmx:100811344; -.
DR eggNOG; KOG1176; Eukaryota.
DR InParanoid; I1MBZ0; -.
DR OMA; AREMEHQ; -.
DR OrthoDB; 1404660at2759; -.
DR Proteomes; UP000008827; Chromosome 14.
DR ExpressionAtlas; I1MBZ0; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005777; C:peroxisome; IBA:GO_Central.
DR GO; GO:0016405; F:CoA-ligase activity; IBA:GO_Central.
DR CDD; cd05904; 4CL; 1.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR InterPro; IPR042099; ANL_N_sf.
DR PANTHER; PTHR24096:SF413; 4-COUMARATE--COA LIGASE-LIKE 5; 1.
DR PANTHER; PTHR24096; LONG-CHAIN-FATTY-ACID--COA LIGASE; 1.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 246..268
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 43..409
FT /note="AMP-dependent synthetase/ligase"
FT /evidence="ECO:0000259|Pfam:PF00501"
FT DOMAIN 460..535
FT /note="AMP-binding enzyme C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13193"
SQ SEQUENCE 549 AA; 59550 MW; 35A0FE16939BB4AC CRC64;
MMEEIDPRSG FCSSNSIFYS KRKPLPLPPN NALDVTTFIS SRAHRATTAF VDAATARRLT
YTQLWRSVEG VAASLSVDMG IRKGNVVLIL SPNSIHFPVV CLAVMSLGAI ITTTNPLNTT
REIAKQIADS KPLLAFTISD LLPKITAAAP SLPIVLMDND GANNNNNNNN IVATLDEMAK
KEPVAQRVKE RVEQDDTATL LYSSGTTGPS KGVVSSHRNL IAMVQIVLGR FHMEENETFI
CTVPMFHIYG LVAFATGLLA SGSTIVVLSK FEMHDMLSSI ERFRATYLPL VPPILVAMLN
NAAAIKGKYD ITSLHSVLSG GAPLSKEVIE GFVAKYPNVT ILQGYGLTES TGVGASTDSL
EESRRYGTAG LLSPATQAMI VDPESGQSLP VNRTGELWLR GPTIMKGYFS NEEATTSTLD
SKGWLRTGDI CYIDNDGFIF IVDRLKELIK YKGYQVPPAE LEALLLTHPA ILDAAVIPYP
DKEAGQHPMA YVVRKAGSSL SETQVMDFVA GQVAPYKRIR KVAFISSIPK NPSGKILRKD
LIKLATSKL
//
