ID I1MFE6_SOYBN Unreviewed; 492 AA.
AC I1MFE6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE RecName: Full=HMA domain-containing protein {ECO:0000259|PROSITE:PS50846};
GN Name=100786567 {ECO:0000313|EnsemblPlants:KRH11382};
GN ORFNames=GLYMA_15G104400 {ECO:0000313|EMBL:KRH11382.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH11382};
RN [1] {ECO:0000313|EMBL:KRH11382.1, ECO:0000313|EnsemblPlants:KRH11382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH11382};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH11382.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH11382}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH11382};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH11382.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH11382.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the HIPP family.
CC {ECO:0000256|ARBA:ARBA00024045}.
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DR EMBL; CM000848; KRH11382.1; -; Genomic_DNA.
DR RefSeq; XP_006597574.1; XM_006597511.2.
DR AlphaFoldDB; I1MFE6; -.
DR SMR; I1MFE6; -.
DR PaxDb; 3847-GLYMA15G11120-1; -.
DR EnsemblPlants; KRH11382; KRH11382; GLYMA_15G104400.
DR GeneID; 100786567; -.
DR Gramene; KRH11382; KRH11382; GLYMA_15G104400.
DR KEGG; gmx:100786567; -.
DR eggNOG; KOG1603; Eukaryota.
DR HOGENOM; CLU_017291_1_0_1; -.
DR InParanoid; I1MFE6; -.
DR OrthoDB; 1221811at2759; -.
DR Proteomes; UP000008827; Chromosome 15.
DR ExpressionAtlas; I1MFE6; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR CDD; cd00371; HMA; 1.
DR Gene3D; 3.30.70.100; -; 1.
DR InterPro; IPR006121; HMA_dom.
DR InterPro; IPR036163; HMA_dom_sf.
DR PANTHER; PTHR45868:SF74; HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33; 1.
DR PANTHER; PTHR45868; HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED; 1.
DR Pfam; PF00403; HMA; 1.
DR SUPFAM; SSF55008; HMA, heavy metal-associated domain; 1.
DR PROSITE; PS50846; HMA_2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 9..72
FT /note="HMA"
FT /evidence="ECO:0000259|PROSITE:PS50846"
FT REGION 94..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 153..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 240..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..303
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..337
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 492 AA; 51821 MW; 3CCE19526AA1BA2B CRC64;
MSKEEFLKIQ KCVLKVNIHC DGCKNKVKKI LQKIDGVFTT EIDAEQGKVT VSGNVDPNVL
IKKLAKSGKH AELWGAPKGN NNIQNNMANQ FKNMQIDNNG KGGGNNKGQK GGGGNNQPKG
NNQQGQNPQQ QLQQHLQQLQ HMKGFQDLKL PQFKDMKLPN PNPNPNPKAV KFSLPEEDDL
SDDELDEFDD EFDDEFDDDE MDDPQHPLNK MMMMKPPMGG KPPVGNVPMG NGASMMLNSM
MNAQKGGNGG GGNGKKGGGG GGGGPVPVQV HNMGGGNEGK NGNGGKKGGG GNNQNQGGGN
KNNGGKNGGG MPEGKNGNSK NNGGGGIPNN NGNGGKKGNN GMGEGVQAMN MFPNMGGHNP
SMVGANMGPM NNMSIPMGNM PMTQMGNIPA VQGLPAAAAM NGGAAGGGYF QGGGGGPDMM
PGGNSYQQQQ YMAAMMNQQR AMGNDRFQPM MYARPPMAVN YMYPPPYSYP PPPHEPYSNY
FSDENTSSCS VM
//