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Database: UniProt
Entry: I1MQA1_SOYBN
LinkDB: I1MQA1_SOYBN
Original site: I1MQA1_SOYBN 
ID   I1MQA1_SOYBN            Unreviewed;       522 AA.
AC   I1MQA1;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=100806937 {ECO:0000313|EnsemblPlants:KRH09249};
GN   ORFNames=GLYMA_16G206000 {ECO:0000313|EMBL:KRH09249.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC   Glycine subgen. Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH09249};
RN   [1] {ECO:0000313|EMBL:KRH09249.1, ECO:0000313|EnsemblPlants:KRH09249}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH09249};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH09249.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA   Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA   Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R.C., Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH09249}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH09249};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH09249.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH09249.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA   Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA   Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA   Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA   Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA   Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA   Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA   Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CM000849; KRH09249.1; -; Genomic_DNA.
DR   RefSeq; XP_003549152.1; XM_003549104.3.
DR   AlphaFoldDB; I1MQA1; -.
DR   SMR; I1MQA1; -.
DR   STRING; 3847.I1MQA1; -.
DR   PaxDb; 3847-GLYMA16G33110-1; -.
DR   EnsemblPlants; KRH09249; KRH09249; GLYMA_16G206000.
DR   GeneID; 100806937; -.
DR   Gramene; KRH09249; KRH09249; GLYMA_16G206000.
DR   KEGG; gmx:100806937; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_2_1; -.
DR   InParanoid; I1MQA1; -.
DR   OMA; QNAYKTP; -.
DR   OrthoDB; 773687at2759; -.
DR   Proteomes; UP000008827; Chromosome 16.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          170..204
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          302..336
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   522 AA;  58252 MW;  8FF2896CEA6F1A13 CRC64;
     MKPNLNEHVL DTLSKSNHLN HLKQLQAYLT TLGHAHTHFY AFKLIRFCTL TLSNLTYARL
     IFDHIPSLNT HLFTAMITAY AAHPATHPSA LSLFRHMLRS QPPRPNHFIF PHALKTCPES
     CAAESLHAQI VKSGFHEYPV VQTALVDSYS KVSGGLGNAK KVFDEMSDRS VVSFTAMVSG
     FARVGDVESA VRVFGEMLDR DVPSWNALIA GCTQNGAFTQ GIELFRRMVF ECNRPNGVTV
     VCALSACGHM GMLQLGRWIH GYVYKNGLAF DSFVLNALVD MYGKCGSLGK ARKVFEMNPE
     KGLTSWNSMI NCFALHGQSD SAIAIFEQMV EGGGGVRPDE VTFVGLLNAC THGGLVEKGY
     WYFEMMVQEY GIEPQIEHYG CLIDLLGRAG RFDEAMDVVK GMSMEPDEVV WGSLLNGCKV
     HGRTDLAEFA AKKLIEIDPH NGGYRIMLAN VYGELGKWDE VRNVWRTLKQ QKSYKVPGCS
     WIEVDDQVHQ FYSLDKSNPK TEDLYIVLES LVGFRNEVMG EP
//
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