ID I1MRB7_SOYBN Unreviewed; 877 AA.
AC I1MRB7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100785921 {ECO:0000313|EnsemblPlants:KRH02160};
GN ORFNames=GLYMA_17G020500 {ECO:0000313|EMBL:KRH02160.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH02160.1};
RN [1] {ECO:0000313|EMBL:KRH02160.1, ECO:0000313|EnsemblPlants:KRH02160}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH02160};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH02160.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH02160}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH02160};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH02160.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH02160.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000850; KRH02160.1; -; Genomic_DNA.
DR RefSeq; XP_006600327.1; XM_006600264.2.
DR AlphaFoldDB; I1MRB7; -.
DR SMR; I1MRB7; -.
DR STRING; 3847.I1MRB7; -.
DR PaxDb; 3847-GLYMA17G02360-1; -.
DR EnsemblPlants; KRH02160; KRH02160; GLYMA_17G020500.
DR GeneID; 100785921; -.
DR Gramene; KRH02160; KRH02160; GLYMA_17G020500.
DR KEGG; gmx:100785921; -.
DR eggNOG; ENOG502QWJB; Eukaryota.
DR HOGENOM; CLU_012143_0_1_1; -.
DR InParanoid; I1MRB7; -.
DR OMA; LKFQSWE; -.
DR OrthoDB; 1222799at2759; -.
DR Proteomes; UP000008827; Chromosome 17.
DR CDD; cd23128; RING-HC_MIP1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR046934; PIR2-like.
DR InterPro; IPR046527; PIR2-like_helical.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46405; OS05G0141500 PROTEIN; 1.
DR PANTHER; PTHR46405:SF2; OS05G0141500 PROTEIN; 1.
DR Pfam; PF20235; PIR2-like_helical; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 823..863
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 245..264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 556..639
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 672..773
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 245..259
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 877 AA; 97368 MW; C8950EBE9281C527 CRC64;
MSPSVSSQEK GSRNKRKFRA DPPLGEPNKF IPAPQLECLS YEFSAEKFEI TPGHRQVAAC
DLCGLSQDHS DGLKLGLGLY SPGTSEVGPS QSKDKPETDE INDADWSDLT EAQLEELVLT
NLDIILKSAI KKIVACGYTE EVATKAILRP GICYGCKDTL SNIVDNTLAF LRNAQEIDTL
REHYFEDLVQ LEKYVLAELV CVLQEVRPFF SVGDAMWCLL ICDMNVSHAC AMDCNPLSSL
GNDNTTSAGS SSQAEPQSKA ETKCPELSLL SPSKSIPAGS HYSQSKKPFV TGIPVVNNLN
SQIIGGTSEK EGASCGSECI NKAFSAAGTS QSGLMEEKRG TVRKVHSGST MRDYVLRHKS
FHVEKKFRTY ELKGSSRGGK VNGLSGLVLD KKLKSVSESS TINLKSASLQ ISKAMGIDTT
QDNINVNFSS NAGTSTSTAF SPVDSSNAVC RSTNTSFAIN AAHTIPLFSC PASLSATNTD
LSLSLSSKIK PSTESVCSNN EAPNSSYMGI PYNNIKSPRQ WIPQDGKDEM LLKLFPRVQE
LQNQLQEWTE WANQKVMQAA CRLSKEKAEL QTLRQEKEEV ERLKKEKQSL EENTLKKLSE
MENALCKVSG QVERANAAVR KLEVEKAALR KEMEAAKIHA TETAASCQEV SRREKKAQIK
FQSWEKQKSF FKEELTIEKQ KLAQLLHELE QARVQQEQVE GRWQQEAKAK EELILQASSI
RKEREQIEES GKSKEDAIKL KAERNLQSYR DDIQKLEKEI SQLRLKTDSS KIATLRMGID
GCYARKFLDI KNGTAQKEPW ASFISELVID HSATGSVKRE RECVMCLSEE MSVVFLPCAH
QVVCTPCNEL HEKQGMQDCP SCRSPIQQRI AVRFPRY
//
