ID I1MSW5_SOYBN Unreviewed; 510 AA.
AC I1MSW5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100813190 {ECO:0000313|EnsemblPlants:KRH02947};
GN ORFNames=GLYMA_17G068400 {ECO:0000313|EMBL:KRH02947.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH02947.1};
RN [1] {ECO:0000313|EMBL:KRH02947.1, ECO:0000313|EnsemblPlants:KRH02947}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH02947};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH02947.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH02947}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH02947};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH02947.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH02947.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000850; KRH02947.1; -; Genomic_DNA.
DR EMBL; CM000850; KRH02948.1; -; Genomic_DNA.
DR RefSeq; XP_006600509.1; XM_006600446.2.
DR AlphaFoldDB; I1MSW5; -.
DR SMR; I1MSW5; -.
DR STRING; 3847.I1MSW5; -.
DR PaxDb; 3847-GLYMA17G07600-3; -.
DR EnsemblPlants; KRH02947; KRH02947; GLYMA_17G068400.
DR EnsemblPlants; KRH02948; KRH02948; GLYMA_17G068400.
DR Gramene; KRH02947; KRH02947; GLYMA_17G068400.
DR Gramene; KRH02948; KRH02948; GLYMA_17G068400.
DR eggNOG; ENOG502QR1Y; Eukaryota.
DR HOGENOM; CLU_035461_0_0_1; -.
DR InParanoid; I1MSW5; -.
DR OMA; HRSDYIN; -.
DR OrthoDB; 303440at2759; -.
DR Proteomes; UP000008827; Chromosome 17.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR24128:SF12; E3 UBIQUITIN-PROTEIN LIGASE XBAT32; 1.
DR PANTHER; PTHR24128; HOMEOBOX PROTEIN WARIAI; 1.
DR Pfam; PF00023; Ank; 2.
DR Pfam; PF12796; Ank_2; 2.
DR PRINTS; PR01415; ANKYRIN.
DR SMART; SM00248; ANK; 5.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 5.
DR PROSITE; PS50088; ANK_REPEAT; 5.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT REPEAT 50..82
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 83..115
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 117..138
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 178..210
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 221..253
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 318..368
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 413..432
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 510 AA; 55304 MW; 869C146551C970D7 CRC64;
MKFLSIVGNS FGCSASGERL VSAARDGDIQ EAKALLEYNP RLARYSTFGV RNSPLHYSAA
HGHHEIVNLL LESGVDINLR NYRGQTALMQ ACQHGHWEVV QTLIIFNANI HKADYLNGGT
VLHLAALNGH TRCIRLILAD YIPSVPNFWN ALQTGDHKSI SEFDQSGLCE VINRTADGGI
TALHMAVLNG HAESVQLLLD LGASVSEVTV EDGTTIDLIG SGSTPLHYAA CGGNQQCCQL
LIAKGANLTA ENANGWTPLM VARSWRRDWL EDILKTPPED PLQVLPSPYI SLPLMSIVRI
ARECGWRTSD LAPCLDPCAV CLERKCMVAV EGCDHEFCTQ CAMYLCSTNS TSTTTTGPPG
SIACPLCRHG IVSFVKLPDA RPLHKEMQRT SNLSLTLCTC SSEVLGDSSD MTTPFCKPTS
SRGSKSSSPS RSFRSMSCQG FPSFRMNPSL CLGADVSPSL VPCTVSRNVR NHLARCSGST
FRRSSSQTER RKSSWFCSLN QSVATGGNRC
//
