ID I1MUI8_SOYBN Unreviewed; 635 AA.
AC I1MUI8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN Name=100801257 {ECO:0000313|EnsemblPlants:KRH03849};
GN ORFNames=GLYMA_17G124300 {ECO:0000313|EMBL:KRH03849.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH03849.1};
RN [1] {ECO:0000313|EMBL:KRH03849.1, ECO:0000313|EnsemblPlants:KRH03849}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH03849};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH03849.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH03849}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH03849};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH03849.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH03849.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000850; KRH03849.1; -; Genomic_DNA.
DR RefSeq; XP_003549820.1; XM_003549772.3.
DR AlphaFoldDB; I1MUI8; -.
DR SMR; I1MUI8; -.
DR STRING; 3847.I1MUI8; -.
DR PaxDb; 3847-GLYMA17G13340-1; -.
DR EnsemblPlants; KRH03849; KRH03849; GLYMA_17G124300.
DR GeneID; 100801257; -.
DR Gramene; KRH03849; KRH03849; GLYMA_17G124300.
DR KEGG; gmx:100801257; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_022294_0_0_1; -.
DR InParanoid; I1MUI8; -.
DR OMA; GQKRIDD; -.
DR OrthoDB; 1210382at2759; -.
DR Proteomes; UP000008827; Chromosome 17.
DR GO; GO:0008380; P:RNA splicing; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR044578; BIR6-like.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47003; OS01G0970900 PROTEIN; 1.
DR PANTHER; PTHR47003:SF2; OS01G0970900 PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF17177; PPR_long; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 267..301
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 315..469
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 374..408
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 409..443
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 444..478
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 515..549
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 635 AA; 72640 MW; 762112019B6FD118 CRC64;
MNRLRAIVVN LRFLESPLAS RVTATRSLLL TRNQVTHFSL CTPSPLLDNS HHFLLPNIHQ
NLYFSSKPNS IVELVLTSDW SKGLEQELEK CYPSMTHETV VYVLKRMEAN PEKAWCFFNW
VSAKEWYRPS SSLYGLILRV LATEETIKLF WITLRTMKTK GFYFDEEMYF PILAGFKRKN
MNKDRVSLTR FYSQGIQENA MQIVVTKVVD IISGSEWGDE VMSNLAKLEI RMSDNFVTRV
LKELRNCPLK AYEFFNWVGK QSGYEHDTVT YNAIARVLAS TDSIEKFWSV IEEMKSVGHE
LDIDTYIKIS KKLQKNKMME DAVKLYELTM DGSYKPSVKD CSLLLKSISA SDDPNLDLVF
RVSKKYESTW HTLSKAIYDG IHRSLSGAGK LDEAESIVNH MRNAGYEPDN ITYNQTIFGF
CKMRKLDEAC KVLEEMESCG FIPEIKTWTI LIQGHCVANE VDRALLCLNR MIEKGCNADA
AVLGVLIGSF LGQKRIDDAY KLLVEIVSKH GTSPRHGTYA KLIDNLLGIG KLEEALDLHC
LMRNHEFTPI IEPFVQYISK FGSIEDAIKF LKSKGTPRSH SVYFRVFKSL LGNGRLSDAK
DLLSKIPYIS KRKKILELFS SMENCTVHGL SHISQ
//