ID I1N3C0_SOYBN Unreviewed; 281 AA.
AC I1N3C0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 66.
DE RecName: Full=K Homology domain-containing protein {ECO:0000259|SMART:SM00322};
GN Name=100816420 {ECO:0000313|EnsemblPlants:KRH00513};
GN ORFNames=GLYMA_18G217500 {ECO:0000313|EMBL:KRH00513.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH00513.1};
RN [1] {ECO:0000313|EMBL:KRH00513.1, ECO:0000313|EnsemblPlants:KRH00513}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH00513};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH00513.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH00513}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH00513};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH00513.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH00513.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000851; KRH00513.1; -; Genomic_DNA.
DR RefSeq; XP_003552330.1; XM_003552282.3.
DR AlphaFoldDB; I1N3C0; -.
DR SMR; I1N3C0; -.
DR STRING; 3847.I1N3C0; -.
DR PaxDb; 3847-GLYMA18G44980-1; -.
DR EnsemblPlants; KRH00513; KRH00513; GLYMA_18G217500.
DR GeneID; 100816420; -.
DR Gramene; KRH00513; KRH00513; GLYMA_18G217500.
DR KEGG; gmx:100816420; -.
DR eggNOG; KOG1588; Eukaryota.
DR InParanoid; I1N3C0; -.
DR OrthoDB; 1397at2759; -.
DR Proteomes; UP000008827; Chromosome 18.
DR ExpressionAtlas; I1N3C0; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0048024; P:regulation of mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR InterPro; IPR045071; BBP-like.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR032377; STAR_dimer.
DR PANTHER; PTHR11208:SF42; KH DOMAIN-CONTAINING PROTEIN SPIN1; 1.
DR PANTHER; PTHR11208; RNA-BINDING PROTEIN RELATED; 1.
DR Pfam; PF16544; STAR_dimer; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR PROSITE; PS50084; KH_TYPE_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 131..231
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 255..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 256..281
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 281 AA; 31302 MW; 1582A0EF692B9BA3 CRC64;
MSGLYNPNFS PARAASPQIR SNPEVDSQYL SELLAEHQKL GPFMQVLPIC SRLLNQEILR
VSGMLSNQGF GDFDRLRHRS PSPMASSNLM SNVSGTGLGG WNSLQQERLC GPPGMTMDWQ
SAPASPSSFT VKRILRLEIP VDTYPNFNFV GRLLGPRGNS LKRVEATTGC RVYIRGKGSI
KDPDKEEKLR GRPGYEHLNE PLHILIEAEL PANVVDIRLR QAQEIIEELL KPVDESQDYI
KRQQLRELAM LNSNFREESP GPSGSVSPFN SSGMKRAKTG R
//
