ID I1NJ65_SOYBN Unreviewed; 585 AA.
AC I1NJ65;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=PGG domain-containing protein {ECO:0000259|Pfam:PF13962};
GN Name=100802596 {ECO:0000313|EnsemblPlants:KRG92972};
GN ORFNames=GLYMA_20G241200 {ECO:0000313|EMBL:KRG92972.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRG92972};
RN [1] {ECO:0000313|EMBL:KRG92972.1, ECO:0000313|EnsemblPlants:KRG92972}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG92972};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG92972.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG92972}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG92972};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG92972.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG92972.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CM000853; KRG92972.1; -; Genomic_DNA.
DR RefSeq; XP_003556545.1; XM_003556497.3.
DR AlphaFoldDB; I1NJ65; -.
DR SMR; I1NJ65; -.
DR STRING; 3847.I1NJ65; -.
DR PaxDb; 3847-GLYMA20G38510-1; -.
DR EnsemblPlants; KRG92972; KRG92972; GLYMA_20G241200.
DR GeneID; 100802596; -.
DR Gramene; KRG92972; KRG92972; GLYMA_20G241200.
DR KEGG; gmx:100802596; -.
DR eggNOG; KOG0504; Eukaryota.
DR HOGENOM; CLU_000134_49_0_1; -.
DR InParanoid; I1NJ65; -.
DR OMA; DIKECLY; -.
DR OrthoDB; 5476624at2759; -.
DR Proteomes; UP000008827; Chromosome 20.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR CDD; cd03493; SQR_QFR_TM; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 2.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR026961; PGG_dom.
DR PANTHER; PTHR24186:SF48; ANKYRIN REPEAT-CONTAINING PROTEIN ITN1; 1.
DR PANTHER; PTHR24186; PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT; 1.
DR Pfam; PF12796; Ank_2; 3.
DR Pfam; PF13962; PGG; 1.
DR SMART; SM00248; ANK; 7.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 4.
DR PROSITE; PS50088; ANK_REPEAT; 4.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 412..434
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 446..474
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 494..514
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 520..545
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 122..154
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 157..181
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 225..257
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 259..291
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 407..513
FT /note="PGG"
FT /evidence="ECO:0000259|Pfam:PF13962"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 585 AA; 63577 MW; 958A0567A07D5481 CRC64;
MASHSNQPGP GAEGQGEKDP FCEISPSPSP SSATAPALVL SNSGKRIDQA GKKKYVKQVT
GRHNDTELHL AAQRGDVGAV RQILEDVDSQ IMRTLSGGDD DVDLNAEIAE VRACLVNEEN
EPGETPLFTA AEKGHLDVVK ELLNYSNAQT VSKKNRSGFD PLHIAASQGH HSIVQVLLDY
NPGLSKTIGP SNSTPLITAA TRGHTEVVNE LLSKDCSLLE IARSNGKNAL HLAARQGHVE
IVKALLSKDP QLARRTDKKG QTALHMAVKG QSCDVVKLLL EADAAIVMLP DKFGNTALHV
ATRKKRVEIV NELLHLPDTN VNALTRDHKT ALDIAENLPL SEEASDIKDC LSRYGALRAN
ELNQPRDELR KTVTQIKKDV HTQLEQTKRT NKNVHNISKE LRKLHREGIN NATNSVTVVA
VLFATVAFAA IFTVPGGDDD DGSAVVAAYA AFKIFFVFNA IALFTSLAVV VVQITLVRGE
TKAEKRVVEV INKLMWLASV CTSVAFIASS YIVVGRKNKW AAILVTLVGG VIISGVIGTM
TYYVVRSKRS RSMRKKEKQA ARRSGSNSWH HSEFSNSEVD RIYAL
//
