ID I1P9C0_ORYGL Unreviewed; 132 AA.
AC I1P9C0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Small nuclear ribonucleoprotein Sm D3 {ECO:0000256|RuleBase:RU365050};
DE Short=Sm-D3 {ECO:0000256|RuleBase:RU365050};
DE AltName: Full=snRNP core protein D3 {ECO:0000256|RuleBase:RU365050};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA03G0096600.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA03G0096600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- FUNCTION: Core component of the spliceosomal U1, U2, U4 and U5 small
CC nuclear ribonucleoproteins (snRNPs), the building blocks of the
CC spliceosome. {ECO:0000256|RuleBase:RU365050}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000256|RuleBase:RU365050}. Nucleus
CC {ECO:0000256|RuleBase:RU365050}. Note=SMN-mediated assembly into core
CC snRNPs occurs in the cytosol before SMN-mediated transport to the
CC nucleus to be included in spliceosomes.
CC {ECO:0000256|RuleBase:RU365050}.
CC -!- SIMILARITY: Belongs to the snRNP core protein family.
CC {ECO:0000256|ARBA:ARBA00008146, ECO:0000256|RuleBase:RU365050}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; I1P9C0; -.
DR SMR; I1P9C0; -.
DR STRING; 4538.I1P9C0; -.
DR EnsemblPlants; ORGLA03G0096600.1; ORGLA03G0096600.1; ORGLA03G0096600.
DR Gramene; ORGLA03G0096600.1; ORGLA03G0096600.1; ORGLA03G0096600.
DR eggNOG; KOG3172; Eukaryota.
DR HOGENOM; CLU_099537_1_0_1; -.
DR OMA; HEADGHI; -.
DR Proteomes; UP000007306; Chromosome 3.
DR GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000387; P:spliceosomal snRNP assembly; IEA:UniProtKB-UniRule.
DR CDD; cd01721; Sm_D3; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR027141; LSm4/Sm_D1/D3.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR034099; SmD3.
DR PANTHER; PTHR23338; SMALL NUCLEAR RIBONUCLEOPROTEIN SM; 1.
DR PANTHER; PTHR23338:SF36; SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|RuleBase:RU365050};
KW mRNA processing {ECO:0000256|RuleBase:RU365050};
KW mRNA splicing {ECO:0000256|RuleBase:RU365050};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365050};
KW Ribonucleoprotein {ECO:0000256|RuleBase:RU365050}.
FT DOMAIN 7..79
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 112..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 132 AA; 14265 MW; AB04FF7FEED137BD CRC64;
MSRSLGIPVK LLHEAAGHVV TVELKTGEVY RGAMVECEDN WNCQLDNITF TAKDGKVSQL
EHVFIRGSRV RFMIIPDMLK NAPMFKRLEA RIRGKGSAIG VGRGRAVAMR ARAAAGRGGG
PVGRGGAPPV RR
//
