ID I1PA56_ORYGL Unreviewed; 598 AA.
AC I1PA56;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA03G0125200.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA03G0125200.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1PA56; -.
DR STRING; 4538.I1PA56; -.
DR EnsemblPlants; ORGLA03G0125200.1; ORGLA03G0125200.1; ORGLA03G0125200.
DR Gramene; ORGLA03G0125200.1; ORGLA03G0125200.1; ORGLA03G0125200.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR OMA; IQHCTDH; -.
DR Proteomes; UP000007306; Chromosome 3.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 13..47
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 150..184
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 257..287
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 288..322
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 420..454
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 455..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 598 AA; 64846 MW; 1527BB4CFAB68083 CRC64;
MKLPAWLTAV PPDPRAYGHL IQLCAESGHL AAARQIHARL VAASVTPSNF LASKLISLYS
RADRLRDARR VFDSIPQPSL FAWNAILISL SLHSPDPSAA VRLFASSAVS PDEITLSTLL
RSLAASGPAL SPLVTGELHA VAFLRGFGSD LFVSNALITA YANAGDMRSA RAVFDEMPRR
DVVSWNSLIS ACARACWYRE CLDLFQEFVR VRCSDGDGVG PNGVTVTSVL HACAQLKVVD
FGIGVHRFAA ESGLDMDMVV WNSIIGFYAK CGRLQYARQL LDGMTRKDSI SYSAMITGYM
NNGHVEEGMQ LFRQASARGI SMWNSVIAGL VQNGRQSDVL RLLQEMIASK VLPNSATLSI
VMPSVPSFST LLGAKQAHGY AIRNDYDQSI RLVSALIDAY AKAGFLDTAR KVFKLTEHRS
TIVWTSIISA VAAHGEAVEA LSLFNQMITA GAKPDTVTFT TVLSACAHSG KVAEARKVFN
SMQAVFGISP VIEQYACMVS ALSRAGMLKE AVKLVNKMPF EPNAKVWGAL LNGAAVVGDV
EFGRYAFDRL FIIEPKNTGN YIVMANLYSN AGKWEEAETI RSMLWGVGLE KVPGCTWN
//