GenomeNet

Database: UniProt
Entry: I1PA56_ORYGL
LinkDB: I1PA56_ORYGL
Original site: I1PA56_ORYGL 
ID   I1PA56_ORYGL            Unreviewed;       598 AA.
AC   I1PA56;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza glaberrima (African rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA03G0125200.1, ECO:0000313|Proteomes:UP000007306};
RN   [1] {ECO:0000313|Proteomes:UP000007306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA   Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA   Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA   Zuccolo A.;
RT   "The complete genome of Oryza glaberrima.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORGLA03G0125200.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; I1PA56; -.
DR   STRING; 4538.I1PA56; -.
DR   EnsemblPlants; ORGLA03G0125200.1; ORGLA03G0125200.1; ORGLA03G0125200.
DR   Gramene; ORGLA03G0125200.1; ORGLA03G0125200.1; ORGLA03G0125200.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_1_1; -.
DR   OMA; IQHCTDH; -.
DR   Proteomes; UP000007306; Chromosome 3.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 7.
DR   Pfam; PF13041; PPR_2; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 6.
PE   4: Predicted;
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          13..47
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          150..184
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          257..287
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          288..322
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          420..454
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          455..490
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   598 AA;  64846 MW;  1527BB4CFAB68083 CRC64;
     MKLPAWLTAV PPDPRAYGHL IQLCAESGHL AAARQIHARL VAASVTPSNF LASKLISLYS
     RADRLRDARR VFDSIPQPSL FAWNAILISL SLHSPDPSAA VRLFASSAVS PDEITLSTLL
     RSLAASGPAL SPLVTGELHA VAFLRGFGSD LFVSNALITA YANAGDMRSA RAVFDEMPRR
     DVVSWNSLIS ACARACWYRE CLDLFQEFVR VRCSDGDGVG PNGVTVTSVL HACAQLKVVD
     FGIGVHRFAA ESGLDMDMVV WNSIIGFYAK CGRLQYARQL LDGMTRKDSI SYSAMITGYM
     NNGHVEEGMQ LFRQASARGI SMWNSVIAGL VQNGRQSDVL RLLQEMIASK VLPNSATLSI
     VMPSVPSFST LLGAKQAHGY AIRNDYDQSI RLVSALIDAY AKAGFLDTAR KVFKLTEHRS
     TIVWTSIISA VAAHGEAVEA LSLFNQMITA GAKPDTVTFT TVLSACAHSG KVAEARKVFN
     SMQAVFGISP VIEQYACMVS ALSRAGMLKE AVKLVNKMPF EPNAKVWGAL LNGAAVVGDV
     EFGRYAFDRL FIIEPKNTGN YIVMANLYSN AGKWEEAETI RSMLWGVGLE KVPGCTWN
//
DBGET integrated database retrieval system