ID I1PGJ0_ORYGL Unreviewed; 1181 AA.
AC I1PGJ0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE RecName: Full=Calreticulin {ECO:0008006|Google:ProtNLM};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA03G0348600.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA03G0348600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the calreticulin family.
CC {ECO:0000256|ARBA:ARBA00010983}.
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DR AlphaFoldDB; I1PGJ0; -.
DR STRING; 4538.I1PGJ0; -.
DR EnsemblPlants; ORGLA03G0348600.1; ORGLA03G0348600.1; ORGLA03G0348600.
DR Gramene; ORGLA03G0348600.1; ORGLA03G0348600.1; ORGLA03G0348600.
DR eggNOG; KOG0674; Eukaryota.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_9_0_1; -.
DR OMA; ELAGIHC; -.
DR Proteomes; UP000007306; Chromosome 3.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0051082; F:unfolded protein binding; IEA:InterPro.
DR GO; GO:0006457; P:protein folding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 2.60.120.200; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR001580; Calret/calnex.
DR InterPro; IPR018124; Calret/calnex_CS.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF00262; Calreticulin; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 3.
DR PRINTS; PR00626; CALRETICULIN.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR PROSITE; PS00803; CALRETICULIN_1; 1.
DR PROSITE; PS00804; CALRETICULIN_2; 1.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 112..146
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 216..250
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 251..285
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 286..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 422..456
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 457..491
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 558..592
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 36..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1156..1181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..80
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1181 AA; 132737 MW; BCDD66DCDD2ED330 CRC64;
MELLLLHPPP FPSLLLLHKP YHFPSKLRHG RLQEPRVMAS PQAPPLPLSS LQESRSARIR
IPRDEPRPTP PARSSSREEP RFVAETKLIT VHSCAGRLGD AREVFDGMGR RDLLAWSAMI
GAYAIRGMYS DVLALAVTMV EEGVLPDRFL ITRILQACAY AEDLELGRAL HSMAIRRGFM
GRVKDVPVGN SVLVMYAKCG DLGWARKVFD KMVCRDLGTW NSMIFGYCRS AEWEEARHLL
DSMRQEGTQP GVVTWNTLIS SYARFGDLDV AMELLGQMEE SGVAPDVVTW TSLVSGFVHM
DRSDEALRCF IRMRLAGVEP NGMSIACAIS ACASLKLLNQ GKELHSHAIK VGSVNNVLSG
NSLVDMYAKC GEIVAAWRIF SGIPDKDIFS WNSMISGYAQ AGYCGKAYEL FCKMENYGVR
RNVITWNTMI SGYIRNGDDE RAFELFQMME SHGVKRDTAT WNILIAGSVH NGYYDRAIRI
FRQMQALLRR PDYITILSII PAFTNLVASW KVREIHACIF HHNLELDGKI ANALINAYSK
SGNLASACAV FDMHSSRNII SWNCIILAHV LHGSPNEALD LFCQMKQEGV VPDHTTLVTV
IKAYGLTGKV SEGSQTFFNM ANDYNITPEL DHYAAMVDLL GRSGRLKEAY ELIDEMPLIP
NSTVWDTFLT AAVMHGNVRL AHLAARELSA IDPGDPRVQR LGSSLQDLTG KTVDVPEEMT
PNKGRNLDEV ESCSIEIRNK VYVFSNGDNV GLEDTVAELK SMMFKMGHSM LDIGIGTLDV
EEEKEEVVGV HFYVYWVKYL AKCPFAGLHA ANLLNRISLA IKLIHQVDLR VGSHREYYHI
EDGQTTLSKG TEVQKHEHGN VTLRVIDLNG KNEILQVVPI YTLLEQIRII LVDFNSTINI
RDKENEEMLR SEKTEDEKNL IVPLTLLDCF QQCYADEEDY SDLLTLRIDH FAPVHFLSGT
GIAIVEIKCL AKDGWEDRWV KSEWKKEDNT VGEWNHTAGK WNGDTNNKGI QTSEDYRFYA
ISAEYPEFSN KDKTLVLQFS VKHEQKLDCG GGYVKLLGGD VDQKKFGGET PYSIMFGPDI
CGYATKKVHA ILTKGVFEEK EIEKIRKPKN GNNHLIKKDV PCETDQLTHV YTLIIRPDAK
YSILIDNTEK RTGSIYDDCD NLPPKKKKDP EAKKVDVIGK D
//